| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0776 |
|---|
| Symbol | |
|---|
| ID | 8356889 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 942049 |
|---|
| End bp | 943023 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644962929 |
|---|
| Product | KpsF/GutQ family protein |
|---|
| Protein accession | YP_003120475 |
|---|
| Protein GI | 256419822 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation |
|---|
| TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATA GAACGGTTAT TAATATTGCT GAAGTGGCGA AAAGGACGCT GTCCCTCGAG
GCAACAGCGA TCTCCGACCT GAAGCAATAC ATCAATGGTG ATTTTGAAAA GGCGGTAGAG
TGGATCGCGG AATGTGCCGG ACGACTGGTA ATTTCCGGGA TAGGGAAAAG CGCTATCATC
GGTCAGAAAA TTGTTGCCAC GCTGAATTCC ACGGGAACCC CCGCTATTTT TATGCACGCA
GCAGATGCTA TCCACGGAGA TTTGGGTATG ATCCAGCATG ACGATATCAT ATTGTGTATT
TCTAAGAGCG GTAATTCTCC TGAAATAAAA GTACTGGTTC CGCTTGTGAA GAACTTTGGC
AACAGATTGA TTGCCATGGT CGGCAATACG GAGTCTTTTC TGGCACGTGA AGCCCATCTT
ATCCTGAATA CTTCAGTAGA CCAGGAAGCC TGTCCAAATA ATCTGGCGCC TACGACCAGC
ACGACTGCCC AATTGGCAAT GGGGGATGCT TTGGCCGTAT GTTTGATAGA ATGGCATGGA
TTTTCTGCTG CTGATTTTGC AAAAGTTCAT CCGGGAGGTA CACTGGGTAA AAAGCTGTAT
CTCAAGGTCG GAGACCTGAG TCGCCTCCAC CAGGCGCCAC AGGTGACAAA ACAAAGTGCA
CTGAAAGAAG TGATCGTAGC CATCTCTTCC GGTATGCTGG GCGTTACCGC TGTACTGGAC
GCAGAAGGCT CACTGAGTGG AATCATCACT GACGGAGACC TTCGCCGTAT GCTTGAAAAA
GGCATTCCGG GCGAAAGTGT CACAGCAGAA GTTATCATGT CAACGCATCC GAAGACGATC
CAGGAAGACG AACTTGCGGT CAATGCACTC GAAATGATGC GTCAACATGA CATAACACAA
CTATTGGTTT TGAAAGATAA ACGCTATATA GGTATCATTC ATTTACATGA TTTAATCAGG
GAAGGAATTA TATAA
|
|---|
| Protein sequence | MKNRTVINIA EVAKRTLSLE ATAISDLKQY INGDFEKAVE WIAECAGRLV ISGIGKSAII
GQKIVATLNS TGTPAIFMHA ADAIHGDLGM IQHDDIILCI SKSGNSPEIK VLVPLVKNFG
NRLIAMVGNT ESFLAREAHL ILNTSVDQEA CPNNLAPTTS TTAQLAMGDA LAVCLIEWHG
FSAADFAKVH PGGTLGKKLY LKVGDLSRLH QAPQVTKQSA LKEVIVAISS GMLGVTAVLD
AEGSLSGIIT DGDLRRMLEK GIPGESVTAE VIMSTHPKTI QEDELAVNAL EMMRQHDITQ
LLVLKDKRYI GIIHLHDLIR EGII
|
|---|
| |