| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0762 |
|---|
| Symbol | |
|---|
| ID | 8356874 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 927408 |
|---|
| End bp | 928082 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644962914 |
|---|
| Product | ribose 5-phosphate isomerase |
|---|
| Protein accession | YP_003120461 |
|---|
| Protein GI | 256419808 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0120] Ribose 5-phosphate isomerase |
|---|
| TIGRFAM ID | [TIGR00021] ribose 5-phosphate isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACACGA TCACAAAAGC AAAGAAAGCA GCCGGAGAGA AGGCTGCATC GTTGGTACAG
CCCGGTATGT TAGTAGGATT GGGAACCGGG TCAACTGCTT ACTGGGCGAT AGAAAAGATT
GGTCAGATGG TAAAGGAAGG ATTGAATATC CGTGCGGTAG CTACCTCCGT TGCCTCAGAA
CAACAGGCAA TCGCCTTGGG TATACCCATT ACCTCTTTCA GCGAAATTCA GCAGCTGGAC
ATTGATATTG ATGGTGCAGA CGAGATCAGT GAAGATTTAC AGATCATCAA AGGTGGCGGT
GGCGCCCTGT TGCGCGAAAA GATCGTCGCA CACGCCAGCA GAAGGAAAGT GATAGTGGCC
GATGAAAGAA AATATGTAAA GACACTGGGT AAATTCCCGC TGCCGGTAGA AATTATTCCG
TTTGGCTGGG AACTGGTGTT CAAAAGCATA CAAGCCCTGC AAGGCGCTCC TACTTTAAGG
ACCAGAGAAG ATAAACCTTA TATTACAGAC AACGGTAACT ATATCCTCGA TTGTATGTTC
GGCGCTATAG AACACCCGGA ACAACTGCAT CATCAGCTGA AAGCGATGAC AGGTGTTGTG
GAAACCGGTC TGTTTATCAA CCTGAAACCA ACCGTGATTA TTGCATATGA AAACGGTGAA
GTAAAAACCC TCTAA
|
|---|
| Protein sequence | MDTITKAKKA AGEKAASLVQ PGMLVGLGTG STAYWAIEKI GQMVKEGLNI RAVATSVASE
QQAIALGIPI TSFSEIQQLD IDIDGADEIS EDLQIIKGGG GALLREKIVA HASRRKVIVA
DERKYVKTLG KFPLPVEIIP FGWELVFKSI QALQGAPTLR TREDKPYITD NGNYILDCMF
GAIEHPEQLH HQLKAMTGVV ETGLFINLKP TVIIAYENGE VKTL
|
|---|
| |