Gene Cpin_0752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0752 
Symbol 
ID8356864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp911086 
End bp912564 
Gene Length1479 bp 
Protein Length492 aa 
Translation table11 
GC content42% 
IMG OID644962904 
Productphospholipase D/Transphosphatidylase 
Protein accessionYP_003120451 
Protein GI256419798 
COG category[I] Lipid transport and metabolism 
COG ID[COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTATCAGG TATTATACTT TCTCTGGGGC ACAAACTGGC ACATTGCATT GAAAATTATA 
GGGTATGTGC TGATCTCACT TTCCTTTTTG GGTGTGGTAG GCACTATTCT GCTGGAAAAC
CGGAATCCGG TCAAGGCGAT GGCGTATATC ATGTTGCTGG TATTCGTACC CATACTGGGA
TTAGTAGTAT ACTATTACCT GGGAAGAGAT CTCCGCAAGA AACGCCGGTT TACGTTAAAG
GGAAGTAAGG ATGAAACCCT GATGTTACGA TACTGGGAAT CTCAGCGAAA AGAAATTGAC
CAGATGCAAC TCCAGCTCCG CAAACAGGTA GCCAGCAAAC AGGAGATTTC TGCGATGCTG
CTCAATACGA GACATTCTGT ATTATCCTGC GATAACCGTG TACAATTACT GTTGAATGGA
GAAGAGAAAT TTCCGGCAGT AATGGACGCA CTGAGGGCGG CCAAACATCA TATACATATC
GAGTATTACA TCTTTGCTGC GGATGATGTG GGTAATGCGA TAGCAGAGAT ATTGCTGGAG
AAACTGCGGG CGGGCGTAGA AGTAAGATTT ATTTATGATG ACCTGGGCTG TGATAAGATC
GGTGATATAC CAGATCTGCT GGAAGAAAAT GGTGCAGAGG TTTTTGCCTT CTCTCCTGTA
CTGATCAATT TCTATCTGAA TGCGAATTAT CGTAATCATA GAAAGATCAT TATTATCGAT
GGCGAAGTAG GATTTACCGG AGGTATCAAT ATAGATGACC GCTATCTGAA CAATGCGAAG
CATCCGGTAT TCTGGAGAGA TACACACCTG AAGCTGGAAG GAGATGTTGT GAATCTTTTG
CAATTGCAAT TCATGATGAG TTATCGTTAT TGCAGTAAAC AAACCTTTCC GTTTAGTCCA
CCTTATTTTC ACCGTTCGGA TCTGAATGAA AATTGCTTTG CAGACATTGT AGCCAGCGGA
CCAGATTCAG AGTTCCCGAT GGCGATGCAA ACGATACTGA TGGCGATTAA TAATGCACGT
CGTTCTATCC GCATCAGTAA TCCTTATTTT ATTCCCAACG AACAGATATT AACAGCATTG
CAAATGGCCG CATTATCGGG TAAGACAGTG CAGCTTATTT TACCTTTTCG GGGTGATTCA
TTTTTTGTAC AACATGCAGC ACAATCCTAC ATCAAGTCAT TGCTTGATGC AGGTGTGAAA
GTGTATTTTT ATCAGAAAGG TTTTATACAT GCGAAGTCAA TTGCAATAGA TGATAATCTT
GCAATTGTTG GTTCTGTAAA CCTTGACTAC CGGAGCTTTT ATCTGAATAG TGAAATTGCT
GTCGTCGTTT ATGACAAGAC CTTTGTGCAT AAGCTGAATG CAGCATTTGA ACAGGATCTG
CAGGACTCCG AACACATTGA TCGTCGTTCC TGGAGAAATC GTTCTTTGTG GCAGAAGTTT
ATAGATGGCG TATGCAGATT ATTGACTCCG TTATTATAG
 
Protein sequence
MYQVLYFLWG TNWHIALKII GYVLISLSFL GVVGTILLEN RNPVKAMAYI MLLVFVPILG 
LVVYYYLGRD LRKKRRFTLK GSKDETLMLR YWESQRKEID QMQLQLRKQV ASKQEISAML
LNTRHSVLSC DNRVQLLLNG EEKFPAVMDA LRAAKHHIHI EYYIFAADDV GNAIAEILLE
KLRAGVEVRF IYDDLGCDKI GDIPDLLEEN GAEVFAFSPV LINFYLNANY RNHRKIIIID
GEVGFTGGIN IDDRYLNNAK HPVFWRDTHL KLEGDVVNLL QLQFMMSYRY CSKQTFPFSP
PYFHRSDLNE NCFADIVASG PDSEFPMAMQ TILMAINNAR RSIRISNPYF IPNEQILTAL
QMAALSGKTV QLILPFRGDS FFVQHAAQSY IKSLLDAGVK VYFYQKGFIH AKSIAIDDNL
AIVGSVNLDY RSFYLNSEIA VVVYDKTFVH KLNAAFEQDL QDSEHIDRRS WRNRSLWQKF
IDGVCRLLTP LL