| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0729 |
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| Symbol | |
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| ID | 8356841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 875622 |
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| End bp | 876392 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644962881 |
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| Product | transcriptional regulator, DeoR family |
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| Protein accession | YP_003120428 |
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| Protein GI | 256419775 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0000103564 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCAATGA TCAATATTGC AGAAAGGCAC AAATACATTC TTGATCGTTT ATCAGAGAAG
GGATATGTGA ATGTGGTGGA CCTCTGCAAG GAACTGGATG TTTCCGGTGT TACCATCCGT
AAAGACCTCA AACTGCTTGA AGACAAATCC CTGTTGTTCC GTTCTCATGG AGGAGCAACA
GTAAATAATC CGTACATCAA TGATAAACCG GTGAACGAGA AGGAAAAGCT TCGCCGGGAT
GAAAAAAATA ATATTGCAAT AGCGGCGGCG GCCATGATTG CGCCAAACGA CGCTATCATT
ATATCATCTG GTACGACGGC ACTGGCACTG GCAAGAAATG TGCATCCGAA AGGACACCTG
ACAGTCATCA CGCCGGCCCT GAATGTGGCG CAGGAACTGC TGAGACATCC GGAAATTGAG
GTGTTACAGC TGGGTGGTAT TGTAAGAAAC AGTTCTGCCT CAGTAACAGG TACTTATGCA
GAGCGTATCC TCGCTGACTT CTCCTGTTCG AAACTGTTTC TCGGACTGGA AGGTATCGAT
ATAGAATTCG GTCTGACCAC CACCAACCTG ATGGAGGCGC AACTGAATGC ACGTATGGTG
ACAGCAGCGC AGAAAACAAT TGTCCTTGCT GACTCTTCTA AATTTGGCCG TCGCGGTTTC
GGGAAAATCT GCGATCTGGA AGATGTAGAT GAGATCATTA CAGACAGCGG TATATCAGGA
CACGTGGTTA AAGCCCTTGA AGAAATGGGG ATTAATGTCA CGATCGTTTA A
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| Protein sequence | MSMINIAERH KYILDRLSEK GYVNVVDLCK ELDVSGVTIR KDLKLLEDKS LLFRSHGGAT
VNNPYINDKP VNEKEKLRRD EKNNIAIAAA AMIAPNDAII ISSGTTALAL ARNVHPKGHL
TVITPALNVA QELLRHPEIE VLQLGGIVRN SSASVTGTYA ERILADFSCS KLFLGLEGID
IEFGLTTTNL MEAQLNARMV TAAQKTIVLA DSSKFGRRGF GKICDLEDVD EIITDSGISG
HVVKALEEMG INVTIV
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