Gene Cpin_0727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0727 
Symbol 
ID8356839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp872141 
End bp873682 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content51% 
IMG OID644962879 
Productglycerol kinase 
Protein accessionYP_003120426 
Protein GI256419773 
COG category[C] Energy production and conversion 
COG ID[COG0554] Glycerol kinase 
TIGRFAM ID[TIGR01311] glycerol kinase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.000015647 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGGAAA AGGAAATAAC CCGGTATATC CTGGCACTCG ACCAGGGGAC TACCAGCTCA 
AGAGCCATCA TATTTGATAA AGCGGGCTCC ATCGTCGCTA TTGCCCAAAA AGAATTCCGC
CAGATCTTCC CCTCACCGGG ATGGGTCGAA CACGATGCGA ATGAAATCTG GTCCAGTCAG
CTGGGTGTAG CCGCAGAAGC GGTTGCTAAA GCCGGACTCA GAGGCACGGA TATCGCGGCC
ATCGGTATTA CCAATCAGCG GGAAACGACC GTGGTATGGG ACCGGCATAC CGGAAAACCT
ATCCATAATG CTATTGTCTG GCAGGATCGC CGTACAGCCG CCTATTGTGA TGAACTCAAA
GCGGCAGGTC ATGAACAATT GATCAGAGAG AAAACGGGAC TGGTCATTGA TGCTTATTTC
TCCGCCACCA AAGTGAGATG GATCCTGGAA AATGTGGAAG GTGCAAGGGA AAGAGCCGCC
AAAGGACTGC TGGCATTCGG TACTGTAGAT GCCTGGCTTG TATGGAACCT GACGGAAGGA
AAGACACATG CAACAGACAT TACCAATGCG TCCCGCACCA TGTTATTTAA TATACATACC
CAGCAATGGG ATGAAGCGTT ACTGACCCTG TTTGATATTC CAGCAGCTAT GCTGCCGGAG
GTAAAGCAAT CCAGTGAGCT GATCGGACAG ACCACTTCCG CGATCTTTTC CACGACTATC
CCGATTGCCG GTATAGCCGG AGATCAGCAC GCCGCATTGT TCGGACAGAT GTGTACAGCG
CCGGGTATGG TGAAGAACAC TTATGGGACC GGATGTTTTA TGCTGATGAA TATCGGAGAA
CAACCGATTA TTTCGCAGAA CAACCTGGTG ACGACTATCG CCTGGAAAAT AAATGGCAAA
GTAGAATATG CGCTGGAAGG CAGCATTTTC ATTGCCGGCG CGGTCGTGCA ATGGTTGCGG
GACGGACTGG GCATCATCCG CTCCTCTTCA GAAGTGGAAG CACTGGCCAG TAAAGTGCCG
CATAATGATG GCGTATACCT GGTACCTGCA TTTGCCGGAT TGGGAGCGCC ACACTGGGAC
CAACATGCGA GGGGTACACT GGTGGGTATG ACCAGGGGCA CAAATGCATC TCATATCGCC
AGAGCGGCGC TGGAAAGTAT CGCTTATCAG ACAATGGAGG TATTGCGGGC CATGGAAGCA
GATGCTGGCA TTAGTATCAA AGAGTTACGT GTGGATGGCG GTGCTACCAA TAATAATCTG
CTGATGCAGT TCCAGGCAGA TATCCTGGAT ACGCAGGTTG TCCGACCTAA AATTACAGAG
ACGACCGCTA TGGGGGCAGC GTATCTGGCC GGACTGGCAA CTGGTTTCTG GAAAGACCAG
GAAGAAATTG CCCGTCAATG GCAGGTAGAC CATTCTTTCG CGCCAAAGGG TAATGCGGAC
GATGTGCATA AATGGGTGCG CGGTTGGGGT AATGCCGTTA AAGCAGTGAG AGCCTGGTCG
AAGTTTTCCG CACAGCAAGA AGAAGACCCT GTTACAAAAT AA
 
Protein sequence
MKEKEITRYI LALDQGTTSS RAIIFDKAGS IVAIAQKEFR QIFPSPGWVE HDANEIWSSQ 
LGVAAEAVAK AGLRGTDIAA IGITNQRETT VVWDRHTGKP IHNAIVWQDR RTAAYCDELK
AAGHEQLIRE KTGLVIDAYF SATKVRWILE NVEGARERAA KGLLAFGTVD AWLVWNLTEG
KTHATDITNA SRTMLFNIHT QQWDEALLTL FDIPAAMLPE VKQSSELIGQ TTSAIFSTTI
PIAGIAGDQH AALFGQMCTA PGMVKNTYGT GCFMLMNIGE QPIISQNNLV TTIAWKINGK
VEYALEGSIF IAGAVVQWLR DGLGIIRSSS EVEALASKVP HNDGVYLVPA FAGLGAPHWD
QHARGTLVGM TRGTNASHIA RAALESIAYQ TMEVLRAMEA DAGISIKELR VDGGATNNNL
LMQFQADILD TQVVRPKITE TTAMGAAYLA GLATGFWKDQ EEIARQWQVD HSFAPKGNAD
DVHKWVRGWG NAVKAVRAWS KFSAQQEEDP VTK