Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0726 |
Symbol | |
ID | 8356838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 871321 |
End bp | 872064 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644962878 |
Product | major intrinsic protein |
Protein accession | YP_003120425 |
Protein GI | 256419772 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0000820267 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATCCCT TATTAGCAGA ATTTCTGGGG ACGATGTTGA TGATATTGCT GGGTAATGGC GTAGTGGCCA ATGTGATCCT CAACCAAACA AAAGGCCATG GCGGCGGCTG GATCGTGATC ACCACCGGCT GGGCACTGGC AGTATTCATC GGGGTGGTCA TCGCTGGTCC CAGCAGCGGC GCACACCTGA ATCCGGCAGT ATCGCTGGCG CTGGCTTTGG CTGGTAAACT CAGCTGGGCA CAGTTTCCGT TATTTGTGAT TGCTCAGTTG CTGGGTGCGA TGTCAGGCGC TTTCCTTGTA TGGGTGATGT ATAAAGATCA CCTGGATGAC ACGGCTGATC CGGGTCTGAT CCAGGCCTGT TACTGTACGG CTCCGGCTAT CCGTAATACC GGCCGTAACC TGATCAGTGA GATTATCGGC ACCTTTGTAT TGCTGTTTAC TATTTTTTAT ATCGTCGACA AAGGAGAATT TGGTGCTGAC AAGACGCCGA TTGGTATGGG ATCATTAGGA GCAGTGCCTG TTTCGCTGCT GGTACTGGCG ATTGGCTTGT CCCTCGGAGG CACTACAGGT TATGCGATCA ATCCTGTCAG AGATTTCGGT CCCCGGCTGA TGCACGCCAT ATTACCTGTG AAAGGAAAAG GCGGCAACGG GTGGGATTAT GCCTGGATCC CGATAATTGG TCCATTGGCC GGAGCGGCCC TTGCAGCAGG ACTTTTCCTC TGCATGAAGG CTGGGGCGAT TTAA
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Protein sequence | MNPLLAEFLG TMLMILLGNG VVANVILNQT KGHGGGWIVI TTGWALAVFI GVVIAGPSSG AHLNPAVSLA LALAGKLSWA QFPLFVIAQL LGAMSGAFLV WVMYKDHLDD TADPGLIQAC YCTAPAIRNT GRNLISEIIG TFVLLFTIFY IVDKGEFGAD KTPIGMGSLG AVPVSLLVLA IGLSLGGTTG YAINPVRDFG PRLMHAILPV KGKGGNGWDY AWIPIIGPLA GAALAAGLFL CMKAGAI
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