Gene Cpin_0713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0713 
Symbol 
ID8356825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp857962 
End bp858480 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content49% 
IMG OID644962865 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_003120412 
Protein GI256419759 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.853775 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCTGA CCTCCCGTCT CCAATTGTTA TCATGTACCC TGCAGTATTT CGAAGCGCTG 
TTGCAGGGCG AGGAGGTATT GAGTGAGTTA CTCCACATCC GTATCCCCGA ACCCTGGACC
GAGTATCCGG AAATAATCCT CGTTGCTTAC GATAAACTGC GTAATGACCC CTCTATGCTG
GGTTGGTTTT TCTACCTCGT TATCCACAAA GAAGACAAAT GCCTGATTGG TGCCGGTGGC
TTTAAAGGAC GCCCCGACAA AGACGGAACT GTTGAAATCG GTTATGAAAT CTCTGCTCCC
TACCGGGAAC AAGGCTATGG TACAGAACTG ACTCAGGCAC TCGTACGCTT CGCGTTCAGT
CATTCCTACG TGAACAAAGT CGTTGCCCAC ACAGAAGAAG AATACAATGC AGCCGTCAAA
GTGCTCCAGA AATCAGGGAT GCATTTTGTA GGAGAAGATC CCGAGCAACT CTGGAAATGG
GAAATAACCC GCGACCAATA CCAATGGCCG CAGGATTGA
 
Protein sequence
MILTSRLQLL SCTLQYFEAL LQGEEVLSEL LHIRIPEPWT EYPEIILVAY DKLRNDPSML 
GWFFYLVIHK EDKCLIGAGG FKGRPDKDGT VEIGYEISAP YREQGYGTEL TQALVRFAFS
HSYVNKVVAH TEEEYNAAVK VLQKSGMHFV GEDPEQLWKW EITRDQYQWP QD