| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0712 |
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| Symbol | |
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| ID | 8356824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 854909 |
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| End bp | 857728 |
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| Gene Length | 2820 bp |
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| Protein Length | 939 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644962864 |
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| Product | DNA polymerase I |
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| Protein accession | YP_003120411 |
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| Protein GI | 256419758 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAGA AATTGTTTTT ACTGGATGCA ATGGCGCTCA TCTATCGCGC GTACTATGCA
TTGATCAGAA ATCCACGCCT GACCAGCACC GGGAGAAATA CCAACGCACA GTTCGGTTTT
ACCTCCACCT TGCTGGACCT CATCAATAAG GAAAAGCCAA CCCACATGGC TGTGGCGTTT
GACACGCATG CCCCCACCGA AAGACACACC ACCTTTGTTG ATTATAAGGC CAACCGTATG
GATGCGCCGG AAGATATCCT CGATTCACTG GACGATATCA AACGCATCAT CAAAGGCTTC
AATATACCTG TTGTTGAACT GGATGGCTAT GAAGCAGATG ACGTGATAGG CACCCTGGCA
TGGCAGGCTG CTGATGCCGG TTACGACGTA TACATGGTAA CCCCCGATAA AGACTATGGT
CAGCTGGTAA GAAACAATGT GTTTATCTAC AAACCTCCTT ACATGGGCAA CAAAGAAGAA
ATTCTTGGTC CGAAGGAAGT GTGTGAAAAA TGGCAGATCA CCGATGTTCA CCAGGTAATA
GATATCCTCG GACTGATGGG GGATGCTGTA GATAACATCC CGGGTATCCC TGGTGTGGGA
GAGAAGACGG CGATGAAACT CTTGTCTCAG TATCACTCCG TAGAAGAAGT GATTGCGAAT
GCGGACAAGA TCGGCGGAAA AATGGGAGAG AAGATCAAGG CCGGTGCAGA AAGTGCCGTT
CTTTCCAAAC AACTGGCCAC CATCATCACA GATGTACCGG TTACTTTCCA TGAAGAAGAT
TTCTGTATTA AAGACCCTAA CAGGGAACAG CTGATAGAAG TTTTCACAGA ACTGGAGTTC
AAAACCCTGG GTAAACGTAT TCTGGGTGAT GGATTCGCAA CGCCTGCTGC AGAACCGGCA
ACGCCTCCTA AAGTACAGCT GGATCTTTTC GGCAATGAAA TACAGGGCGC CGCACCACCG
GTTAGCGAAG AAGCACAGGA CGTACCGCTC AGTATCATGG TGGCTGATAA GAATATCAAC
AACACTCCGC ATAATTATAT CCTGGCAGAT ACGCCTGAAA AAAGAGCGGA GCTCTTAGAA
CTCCTCCTGA AACAACAGGA GATCTCTTTT GATACAGAAA CAACCGGCAC AGATGCCAAT
GCGGTTGACC TGGTGGGGAT GAGCTTCTCC ATCAAAGCAG GAGAGGGCTG GTATATTCCC
GTTCCGGCTG ACAAAGCACA GGCACAAGCT ATTGTAGATA GTTTCCTGCC ACTGTTCAAT
ACTACCCATA TTACCCTCAT TGGTCAGAAT ATCAAATACG ATATGATCGT GATGAAATGG
TACGGGGTTG AATTCAACGG TCCTGTCTTC GATACCATGC TGGCCCACTA CCTTATCGAG
CCGGAAGGCC GTCGTGGTAT GGACCTGCTC AGTGCACAAT ACCTGCAATA CGAACCTGTT
TCTATCGAAA CCCTGATCGG TAAAAAAGGA AAAGGCCAGG GCAATATGCG GGATGTGGAG
ATCGACAAGA TCAAGGAATA TGCAGTAGAA GATGCCGATA TCACCCTGCA GCTGAAAGAG
AAATTCGCTC CTTTATTGCC CCTCAAAGCG GTAGATAAAG TATTCTATGA CGTGGAAAAC
CCACTGGTAA GAGTACTGAC AGATATGGAA TATGAGGGCA TTGCGCTGGA TATTCAGGCT
TTATCCGATT ACTCCCGTGA ACTTGAAACA GAGATCAAAC GCGCAGAAGA AAGTGTATAT
ACACAGGCGG GTGTCCGCTT CAACCTCGCA TCTCCTAAAC AACTGGGAGA GGTGCTGTTT
GAAAAACTGC TGCTGGATCC TAAAGCGAAA AAGACCAAGA CTGGCCAATA CGCTACCGGT
GAGGACGTAT TGGCAAAACT GGCCAATAAA CACCAGATTG TAGAAGACAT CCTGGTATTC
CGCGAACTGA GCAAGCTGAA ATCCACCTAT GTGGATGCGT TGCCGCTGAT GCTGAACAAG
CGTACCAACC GTGTACACAC TTCCTATAAC CAGGCAGTAG CAGTAACCGG TCGTCTGAGT
TCCAACAACC CGAACCTCCA GAATATTCCG ATCCGTACCG ACAGAGGTCG CGAAGTACGT
AAGGCATTTG TTGCGAAAAA TGAAGATTAC GTATTGATGT CTGCGGATTA CTCCCAGATC
GAATTACGTA TCATCGCCGC TATCAGTGGC GACGTACACA TGATCGATGC CTTCCGTCAG
GGACTGGATA TCCATGCTGC CACCGCGGCA AAGGTATATG GTGTTGAACT GGCTGATGTA
ACTGCGGATA TGCGCCGGAA TGCCAAGAGT GTGAACTTCG GTATCATATA CGGGGTGAGC
GCCTTCGGTC TGTCGGAGAA CCTGGGTATT GCCAGGGGAG AAGCCAAAAC ACTGATCGAC
AACTACTTTG CACAATACCC ATCCATCAAA AAGTACATGG ATGACCAGAT AAAATCCGCC
CAGCAGAACG GCTATGTGGA AACCTTACTG GGTCGTAAAC GCTGGTTGAA AGACATTAAC
TCTTCCAACG CGGTGGTAAG AGGTTACGCG GAGCGTAACG CCATCAATAT GCCGATACAG
GGTACTGCGG CCGATATGAT TAAACTGGCG ATGATCTCTA TCCATAAAAC GCTCAAAAAA
GAAAACCTCC GTTCCCGCAT GATATTGCAG GTACATGACG AGTTGGTCTT TGATGTGCAT
AAAGATGAAA TAGAGCAGAT CAAACCACTG ATCCAGGATG GTATGCGCAA TGCCCTGCCA
CTGGCGGTAC CGGTAGATGT TGAAATAGGT ATTGGCGTCA ACTGGTTACA GGCCCACTAA
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| Protein sequence | MQKKLFLLDA MALIYRAYYA LIRNPRLTST GRNTNAQFGF TSTLLDLINK EKPTHMAVAF
DTHAPTERHT TFVDYKANRM DAPEDILDSL DDIKRIIKGF NIPVVELDGY EADDVIGTLA
WQAADAGYDV YMVTPDKDYG QLVRNNVFIY KPPYMGNKEE ILGPKEVCEK WQITDVHQVI
DILGLMGDAV DNIPGIPGVG EKTAMKLLSQ YHSVEEVIAN ADKIGGKMGE KIKAGAESAV
LSKQLATIIT DVPVTFHEED FCIKDPNREQ LIEVFTELEF KTLGKRILGD GFATPAAEPA
TPPKVQLDLF GNEIQGAAPP VSEEAQDVPL SIMVADKNIN NTPHNYILAD TPEKRAELLE
LLLKQQEISF DTETTGTDAN AVDLVGMSFS IKAGEGWYIP VPADKAQAQA IVDSFLPLFN
TTHITLIGQN IKYDMIVMKW YGVEFNGPVF DTMLAHYLIE PEGRRGMDLL SAQYLQYEPV
SIETLIGKKG KGQGNMRDVE IDKIKEYAVE DADITLQLKE KFAPLLPLKA VDKVFYDVEN
PLVRVLTDME YEGIALDIQA LSDYSRELET EIKRAEESVY TQAGVRFNLA SPKQLGEVLF
EKLLLDPKAK KTKTGQYATG EDVLAKLANK HQIVEDILVF RELSKLKSTY VDALPLMLNK
RTNRVHTSYN QAVAVTGRLS SNNPNLQNIP IRTDRGREVR KAFVAKNEDY VLMSADYSQI
ELRIIAAISG DVHMIDAFRQ GLDIHAATAA KVYGVELADV TADMRRNAKS VNFGIIYGVS
AFGLSENLGI ARGEAKTLID NYFAQYPSIK KYMDDQIKSA QQNGYVETLL GRKRWLKDIN
SSNAVVRGYA ERNAINMPIQ GTAADMIKLA MISIHKTLKK ENLRSRMILQ VHDELVFDVH
KDEIEQIKPL IQDGMRNALP LAVPVDVEIG IGVNWLQAH
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