Gene Cpin_0705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0705 
Symbol 
ID8356817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp848372 
End bp849655 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content46% 
IMG OID644962857 
Productpeptidase M16 domain protein 
Protein accessionYP_003120404 
Protein GI256419751 
COG category[R] General function prediction only 
COG ID[COG0612] Predicted Zn-dependent peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAACC GGAAAATTGC CCCTGAAATA AAAGATGCCA CGGCCTTCGA TATCAAGCTG 
AGACCTTACG AAAAGGTCAC ACTGGACAAT GGCATCCCTG TCCATATCAT CAAATCAGAC
GAACAGGATA CTTTACAGCT GGAACTGGTA TTCCCGGGTG GCAGCTGGTA TGAATCAGAA
AATCTGGTTG CATCCGCCAC CAACTTCCTT ATGAAGAATG GTAGTGGAAA ACTTTCTGCC
CTCCAGATCA ATGAAAATAT CGACTACTTC GGTGCATATC TGAACCGGAA CAGTCATCAT
GAATATGCAA CCTATACGCT GCACTGCCTC ACCAAACACT TTGCTGATCT GGTGCCCGTA
TTACAGGAAG TGATCCTTGA TCCGGTTTTT CCAGAAGAAG AACTCGCGAT CTTCCGTCAG
AATATGAAAC AAAGACTGGC GGTAAATCTG CAGAAATGCG ACTTCGTAGC CAACAGGCAT
ATTGACCGCT ACCTCTTCGG TGAGTTTCAC CCATATGGCA GAGTGAGCAG CATGGAAGCC
TATGACGCTT TGCAGTCAGC CACTATGCAG GCTTTCTACA AACAACATTA CACCTACAAT
AACTGTAAGA TCTTTGTAGC AGGTCACCTG CCGGCAAATA TGATAGAAAT GCTGAACGAA
TATTTCGGTA AAACGAAATG GAACGGAGAA GCATCTATCA TTCGTCCTGA GATCTCTATT
ATGGCCGCAG AAGAGAAGAA GTTCCGCATC TTCAATGATG AAAATGGTGT ACAGGGAGCC
GTTCGTGTGG CTCGTCCATT TCCGAACCGC TACCATCCCG ACTTCCCTAA AATGCTGGTG
TTGAACACCA TACTGGGCGG CTACTTTGGC TCCCGTCTGA TGAGCAATAT CCGCGAAGAA
AAAGGATATA CCTACGGGAT ACACTCTCAG CTCTATAACT TCCGCCAGTC CAGCGCTATC
AATATCCAGA CAGAAGCCGG ACGTGATGTA TGCGAAGCAA CCATCGAAGA GATCTACAAA
GAACTGCGTA CCCTCCAGAA AGAGATCGTA CCTGAAGAAG AACTGCACCT GGTGCGCAAC
TTCATGATCG GTTCTATTCT CGGAGACCTG GATGGCGCAT TCGAAGTGAT CCAGCGTTGG
AAAAATCTGA TCCTGAACGG ACTGGATGAA AATTACTTCT ACAATAACAT CAATACCATC
AAGACGATCA CCGCCGAAGA ATTACAGGAA TTAGCACAGG AATACCTGTC TCCTGAAGAC
TTCTATGAAC TGGTAGTAAT CTGA
 
Protein sequence
MINRKIAPEI KDATAFDIKL RPYEKVTLDN GIPVHIIKSD EQDTLQLELV FPGGSWYESE 
NLVASATNFL MKNGSGKLSA LQINENIDYF GAYLNRNSHH EYATYTLHCL TKHFADLVPV
LQEVILDPVF PEEELAIFRQ NMKQRLAVNL QKCDFVANRH IDRYLFGEFH PYGRVSSMEA
YDALQSATMQ AFYKQHYTYN NCKIFVAGHL PANMIEMLNE YFGKTKWNGE ASIIRPEISI
MAAEEKKFRI FNDENGVQGA VRVARPFPNR YHPDFPKMLV LNTILGGYFG SRLMSNIREE
KGYTYGIHSQ LYNFRQSSAI NIQTEAGRDV CEATIEEIYK ELRTLQKEIV PEEELHLVRN
FMIGSILGDL DGAFEVIQRW KNLILNGLDE NYFYNNINTI KTITAEELQE LAQEYLSPED
FYELVVI