| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0698 |
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| Symbol | |
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| ID | 8356810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 841139 |
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| End bp | 842032 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644962850 |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003120397 |
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| Protein GI | 256419744 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3622] Hydroxypyruvate isomerase |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTAACG AAAATTCCCG CCGCGATATG ATTAAAAAGG CTGCTGCTAT GGCGTTTGCG
TCCACATCTC TTGCATCCCT GTCTACCCGT GTGATGGCGC ACGAAAACAA GGTAGAAGAA
AAACTGAAAG GCCAGATCAA CCATTCCGTT TGTGCATGGT GCTACAATGA CATTCCACTG
GAAGACCTGT GTAAGGCGGC CAACAGAATC GGCCTTGCCT CTATTGATCT GCTGGATCCG
AAAGATTTCG CCACCGCTAA AAAATATGAC CTGACCTGCG CCATGGTGGC TTCCATCAAC
AAAGACTGGA ACATCGGCCG GGGCTGGAAC AGGGAAGCAC ATCATGATCA GCTCGTTACA
TACTATGAAT ACCTGATAGA TGAAACATCG AAAGCCGGTT TTACAAACCT GATCTGTTTT
TCCGGTAACC GGGAAGGACT GGACGACCAG GCTGGTATTG AAAACTGTGC AAAAGGATTG
AAACGCATTA TGAGCTATGC GGAGAAGAAA AAAGTAACCA TTGTGATGGA ACTGCTGAAT
AGTAAGGTGA ACCATCCCGA TTACCAGTGT GACCACACCA ACTGGGGTGT AGAGCTGTGT
AAATCAATTG GTTCAGATCG TTTTAAGCTG TTATACGATA TTTATCACAT GCAGATCATG
GAAGGAGACG TAATCCGTAC AATCCAGGAT AATCATCAAT ATTTTGCGCA TTACCATACC
GGTGGCGTTC CAGGCAGAAA TGAGATTGAC GAAACGCAGG AACTTTATTA CCCGGCTATT
ATGAAGGCGA TACACGATAC AGGCTTCAAA GGCTTTGTAG CCCAGGAATT TGTGCCTAAA
CGCGCTGATA AATTGGCGTC TTTGAAACAA GGTGTGGAGA TCTGTGATAT CTAA
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| Protein sequence | MLNENSRRDM IKKAAAMAFA STSLASLSTR VMAHENKVEE KLKGQINHSV CAWCYNDIPL
EDLCKAANRI GLASIDLLDP KDFATAKKYD LTCAMVASIN KDWNIGRGWN REAHHDQLVT
YYEYLIDETS KAGFTNLICF SGNREGLDDQ AGIENCAKGL KRIMSYAEKK KVTIVMELLN
SKVNHPDYQC DHTNWGVELC KSIGSDRFKL LYDIYHMQIM EGDVIRTIQD NHQYFAHYHT
GGVPGRNEID ETQELYYPAI MKAIHDTGFK GFVAQEFVPK RADKLASLKQ GVEICDI
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