Gene Cpin_0694 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0694 
Symbol 
ID8356806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp835002 
End bp836441 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content45% 
IMG OID644962846 
Producthistidine kinase 
Protein accessionYP_003120393 
Protein GI256419740 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCAGC GGATCCGCAA TATTCTGATA CTAATGTGTG TATGTATAGT CGGCATTTAC 
CTGTTTCAGG GATACTGGTT ATACAACTCC TATCATATAC AACTTGATCA GTTCAACAAG
GATATTAATG AATCCCTGCG TACGGCTGTC TTCAACAAAC AGTTTGCGGA TGCCCGCCGT
TACTTCAGGA ATTTCGGGAA AGATCGTGAC CGCGATTCGT TCCGGCTGTC GCCACATGAT
ATGCCTCCTC CTTCCGGAGA ACCGGACATG CGCACGATCC ATCTGCAAAG GGAAAATGTA
ACAGATACGG TTAAACGTAG GAGAGAATTC CGCTATAACA ATGATCCTTC CAAACGTGAA
TATGTTGATA CCCTGGCACG GCAGATCTCA GATCTGATAC TGCTGAATAA CCTGACAAGC
GATAGTGTGA AGCTGGTGAA ACTGGATTCA GTATTTACCG CAGAACTGCA TTCCCGCCAG
ATCCTGACAG GGTATGAGCT GGATACTTTC CATATCGATT TCAATGGTTA TTCCAGGGAT
AGTTTCAGGG ATAGTCTGCG TAAAAGACCT CCGTTACAAA CCTCCAAGAT TCCATTCAAT
CCTGCCAGCA ATCTGTTTGT ACAGGCGAAG TTTGAGTCAC CTTTACAGTA TATCCTGGCG
AAGATGATGT GGACGCTGGT GGGCTCGCTG GTATTGCTGG TACTGACTAC CATCTGTTTT
GTGTATATGT TGCGTACCAT ATTGAAACAG AAGCGTTTGT CGGAGGTGAA AAATGATTTT
ATCAATAACA TGACGCATGA GCTGAAAACG CCTATTGCGA CCGTATACGC TGCGGTGGAA
GCCATGCAGA ACTTTAATGC GCTCAATGAT CAGCGTAAAA CCCAGACTTA CCTGGATATC
TCCAAGCAGG AATTGCAACG TTTGTCAGAT CTGGTGGAGA AAGTATTGCA TATTGCAGCA
GAAGAAAGAG AGGAAATAGA ACTGTTCAGG GAACCGACAG ATCTCAGTGA TATGATGGAC
AGCATCATTA CCAATCACCA GCTGAAGTCC GGTCGCCCGG TACAGTTCCG GTTTGACAAC
CTGGTCGGAG AACGCCTGGT AAAAGTCGAC AGAACGCATC TGACCAATGC GGTGAGCAAT
CTGGTAGACA ACGCGATAAA ATATTCCGGG GATCAGCCTT CCGTATATAT CAAGACCTCC
CTGGAGGGAA GCAGGTTGAT AATCAAGGTG AAAGATAATG GTATCGGTAT CCCGAAGATC
TATCAGCAGA ACATTTTTGA TACCTTTTTC CGTGTGCCTA CCGGTAATCT GCACAATGTA
AAAGGGTTCG GACTGGGGCT GAGTTATGTG AAGAAGATCG TGGAACTGCA TAGCGGTACT
ATCTCCGTCA ACAGCGAACC GGAAAAAGGA AGTGAATTTA TCATACAAAT ACTGGTTTAA
 
Protein sequence
MRQRIRNILI LMCVCIVGIY LFQGYWLYNS YHIQLDQFNK DINESLRTAV FNKQFADARR 
YFRNFGKDRD RDSFRLSPHD MPPPSGEPDM RTIHLQRENV TDTVKRRREF RYNNDPSKRE
YVDTLARQIS DLILLNNLTS DSVKLVKLDS VFTAELHSRQ ILTGYELDTF HIDFNGYSRD
SFRDSLRKRP PLQTSKIPFN PASNLFVQAK FESPLQYILA KMMWTLVGSL VLLVLTTICF
VYMLRTILKQ KRLSEVKNDF INNMTHELKT PIATVYAAVE AMQNFNALND QRKTQTYLDI
SKQELQRLSD LVEKVLHIAA EEREEIELFR EPTDLSDMMD SIITNHQLKS GRPVQFRFDN
LVGERLVKVD RTHLTNAVSN LVDNAIKYSG DQPSVYIKTS LEGSRLIIKV KDNGIGIPKI
YQQNIFDTFF RVPTGNLHNV KGFGLGLSYV KKIVELHSGT ISVNSEPEKG SEFIIQILV