Gene Cpin_0691 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0691 
Symbol 
ID8356803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp832304 
End bp833164 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content48% 
IMG OID644962843 
Product3-hydroxybutyryl-CoA dehydrogenase 
Protein accessionYP_003120390 
Protein GI256419737 
COG category[I] Lipid transport and metabolism 
COG ID[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGACGA TCGATCAGAT AAAAACTATC GTTGTATGCG GCGCCGGTAC GATGGGCGCC 
GGTATCGCCC AGGTAGCGGC TATGAGCGGA TATTATGCCG TTCTTTATGA CCTGCAGACG
GCTGCACTGG AAGGTAGTCA GCAGCGACTG GAAGAATATC TGGATAAGGC AGTCAGCAAA
GGACGTATGA CCCGGGAGGA AAAAGCGGGA ACACTGCAAC GCTACACTAC CACCGCAGAT
ATCAATAAAT GTCAGGCAGA CGTCGTTATT GAGGCGATTG TAGAACGACC AGACATCAAA
AAGGACCTGT TTAGAAAACT GGCAGAGGTC AACGGACGAG ATACCATTTT TGCCAGTAAT
ACTTCTTCCC TTTCCATCTC GCTGATAGCA AAAGACATTA TACATCCGGA ACGGGTGGCC
GGTATGCATT TTTTTAATCC GGCGCCTTTG ATGAAGCTGG TGGAAATTGT GAGTGGCGAT
GAAACTGCGC CCGCGGTAGC GGAGTTGTTA TATACCCTGG CCGGTAAAAT GGGGAAAACA
CCCGTAATGG CGAAAGATAC ACCGGGGTTT ATTGTGAACA GGGTGGCACG GCATTATTAC
CTGGAAGCAA TGCAGATAGC CGCTGAAGGA GTGGCAGATT ATAAAAAAAT TGATCGTTTA
ATGGAAAGCG CTGGCTTTCG TATGGGGCCG TTTGCCTTGA TGGACCTGAT CGGTAATGAT
ATAAATCTGG CGGTTACCCG TTCGATTTAT ACCGCGTATG ACCAGGCGCC CCGTTTTACC
CCCAGTTCGT TACAGATAGA GAAAGTAGAA GAAGGTGCAC TCGGAAAGAA AACCGGGAAG
GGATTTTATA ATTATCTTTG A
 
Protein sequence
MLTIDQIKTI VVCGAGTMGA GIAQVAAMSG YYAVLYDLQT AALEGSQQRL EEYLDKAVSK 
GRMTREEKAG TLQRYTTTAD INKCQADVVI EAIVERPDIK KDLFRKLAEV NGRDTIFASN
TSSLSISLIA KDIIHPERVA GMHFFNPAPL MKLVEIVSGD ETAPAVAELL YTLAGKMGKT
PVMAKDTPGF IVNRVARHYY LEAMQIAAEG VADYKKIDRL MESAGFRMGP FALMDLIGND
INLAVTRSIY TAYDQAPRFT PSSLQIEKVE EGALGKKTGK GFYNYL