Gene Cpin_0688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0688 
Symbol 
ID8356800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp829608 
End bp830552 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content47% 
IMG OID644962840 
ProductUDP-3-O-(3-hydroxymyristoyl) glucosamine N- acyltransferase 
Protein accessionYP_003120387 
Protein GI256419734 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 
TIGRFAM ID[TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTTA ACGAACCGAT CGCGGTAACG GAAATAGCAG CATTCATAGG CGCTACGCTG 
GAAGGCGACG AGAAACTGAT GGCCACCGGC ATCAACGAAA TACATAAGGT TGAACCAGGT
GACATCTCTT TCGTGGATTT CGAAAAGTAC TATGATGCCT GTCTGCGTTC TGCGGCGACG
ATTATCATCA TCAATAAAAA AGTTACTTGC CCTCCGGGTA AAGTTTTACT GATAACAGAC
GATCCATTCA GCGCTTATGT AAAACTGGTT AAACGCTTCC GACCATTCCA ACCTTCCACC
AGTCCCATCA GCGATACTGC TGTAATAGGC GAGGGCACTA TCATACAGCC GAATGTATTC
ATCGGTAATA ATGTCACCAT CGGCACCAAC TGCATCATCC ATCCGAACGT AACTATTTAC
GACAACTCCA TCATCGGTAA CAATGTGATC ATACATGCCG GTAGCGTAAT CGGAGCGGAT
GCTTTCTACT TCAAGAAAAG AGCGAACAGG GAAGTGATGT ATGACAAACT GGAAAGCTGT
GGAAGAGTGA TCATCGAAGA CGACGTGGAG ATCGGCGCAA GCTGTACGAT AGACAAAGGG
GTGAGTGGTG ATACCATCAT CGGTCGTGGC ACAAAATTCG ATAACATGAT CCATATAGGA
CACGGTACGG TGATCGGCCG TAACTGTCTC TTCGCTGGTC AGGTAGGTGT AGGTGGTAAA
GCACACATCG AAGACAACGT AATACTCTGG GGTCAGGTAG GCGTATCCAA AGACCTTACC
ATCGGTAAAG GCGCCATCGT GCTTGCACAA AGTGGTGTTC CTTCTTCTCT CGAAGGAGGT
AAGACTTATT TTGGTTCGCC GGTAGAAGAT GCCCGCACCA AAATGAAAGA ACTCTCCTGG
ATCAAACGTA TCCCTGAGAT CTGGCAGAAA CTGGGTGGCA ATTGA
 
Protein sequence
MKFNEPIAVT EIAAFIGATL EGDEKLMATG INEIHKVEPG DISFVDFEKY YDACLRSAAT 
IIIINKKVTC PPGKVLLITD DPFSAYVKLV KRFRPFQPST SPISDTAVIG EGTIIQPNVF
IGNNVTIGTN CIIHPNVTIY DNSIIGNNVI IHAGSVIGAD AFYFKKRANR EVMYDKLESC
GRVIIEDDVE IGASCTIDKG VSGDTIIGRG TKFDNMIHIG HGTVIGRNCL FAGQVGVGGK
AHIEDNVILW GQVGVSKDLT IGKGAIVLAQ SGVPSSLEGG KTYFGSPVED ARTKMKELSW
IKRIPEIWQK LGGN