Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0687 |
Symbol | |
ID | 8356799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 827765 |
End bp | 829123 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644962839 |
Product | coproporphyrinogen III oxidase |
Protein accession | YP_003120386 |
Protein GI | 256419733 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACTCA TCAGAAAATA TAATACCGCT GCTCCCCGCT ATACCAGTTA TCCCACAGTA CCTTACTGGG ATGAATCTTC TTTCAATACC GATACCTGGA AGCAGGCTTT GCTGCAATCC TTCCGCGCCA CAAACGATAC CGAAGGAATC AGCATTTACA TCCACCTGCC TTATTGTGAA CAGTTGTGTA CATACTGTGG CTGTAATAAG CATATTACAG TCAATCACGG GGTAGAAGCG CCTTATATTG ATTCGCTGCT GAAGGAATGG TCATTATACC TGGAATTATT CAAAAAACGG CCACGCATCA GGGAAATACA TCTCGGTGGA GGCACACCGA CTTTCTTCAG TCCGGAGAAT CTTCATCAGC TCTTATCAGG CATCTATATG CAGGCCGACC TGCTACCGGA TGCAACCCTC AGTTTCGAAG GCCATCCTAA TAACACCACC ACGGCACACA TGCTTACACT CTACAATCTC GGCTTTCGCC GTATGAGTCT CGGCATCCAG GACTTCGATC CGCAGGTACA GGATATCATC AACCGTATAC AACCTTATGA AACGGTAGAG CGGGTAACCG CTGCCGCCAG AGAAATCGGT TATACCTCCA TTAACTATGA CCTGGTATAC GGATTGCCCT TGCAGACTAT CACAAGTGTA AAGGATACCA TCAGCAAAGT CATGCAGCTG CGGCCTGATA GAATTTCCTT CTACAGTTAT GCACATGTTC CCTGGGTGAA AGGTGTCGGA CAAAGGCGAT ATGCTGAAGA AGATCTTCCA AAGGACGAAG AGAAAAGAGC CCTCTATGAA CTGGGTAAAA CAATGTTTGC TGAAAGCGGT TATACAGAGA TTGGTATGGA CCACTTTGCC CTGCCGCACG ACAGCTTATA CCACGCCTGC AAACAGGGTT CACTGCACAG GAACTTTATG GGTTATACCG ATCACCATAC CTCACTGATG ATCGGCTTAG GTGCTTCTTC CATAGGAGAT AGCTGGTATG CATATGCACA GAATGAAAAG AAGATTACTA CCTGGCAACA GTTGGTCAAC AGTGGTCAGT TCCCGGTTGT AAGAGGACAC ATACTCGATA CGGAAGATCT GCTCCTTCGT CGTCATATCC ACGCACTCAT GTGTGGTTTA GATACCCGCT GGACACCGGA CGACAATATT GACAGCGTAA TGGAAGAAAG CCTGCAAAGG CTTACTGAGC TTGAGAAAGA TGGCTTGGTG GATATACAGT ATGGCAGCGT TACCGTCACA GAAAAAGGCA GACCTTTCAT CCGTAATATC TGTATGGCGT TTGATGCCCG CTTGTGGAGA AAGCTGCCGC ATTCCCAACT GTTCAGCAAC GCAATCTGA
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Protein sequence | MQLIRKYNTA APRYTSYPTV PYWDESSFNT DTWKQALLQS FRATNDTEGI SIYIHLPYCE QLCTYCGCNK HITVNHGVEA PYIDSLLKEW SLYLELFKKR PRIREIHLGG GTPTFFSPEN LHQLLSGIYM QADLLPDATL SFEGHPNNTT TAHMLTLYNL GFRRMSLGIQ DFDPQVQDII NRIQPYETVE RVTAAAREIG YTSINYDLVY GLPLQTITSV KDTISKVMQL RPDRISFYSY AHVPWVKGVG QRRYAEEDLP KDEEKRALYE LGKTMFAESG YTEIGMDHFA LPHDSLYHAC KQGSLHRNFM GYTDHHTSLM IGLGASSIGD SWYAYAQNEK KITTWQQLVN SGQFPVVRGH ILDTEDLLLR RHIHALMCGL DTRWTPDDNI DSVMEESLQR LTELEKDGLV DIQYGSVTVT EKGRPFIRNI CMAFDARLWR KLPHSQLFSN AI
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