Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0676 |
Symbol | |
ID | 8356788 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 816489 |
End bp | 817364 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644962828 |
Product | hypothetical protein |
Protein accession | YP_003120375 |
Protein GI | 256419722 |
COG category | [S] Function unknown |
COG ID | [COG1561] Uncharacterized stress-induced protein |
TIGRFAM ID | [TIGR00255] conserved hypothetical protein TIGR00255 |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.106933 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAAAT CAATGACCGG CTTTGGAAGG GCGGAAATAA CCAAGGGGGA AACTACGATT GTTGTGGAAG TGAAATCGCT GAACGGGAAG CAGTTTGAGG TGAACCTTAA AATATCGCCA TTACTAAAGC CTTATGAGTT TGACATCCGT AATATAATGC AGCAGTCTTT GTTGCGTGGT ACATTGGATG CGACGGTAAA TATCAGGCAG AATGGAGCTA CGCGTCCGGT GGTAATCAAC ACTGATCTTG CGAAGTATTA CCATCAGTCC ATCAAGACGC TGGCTACAGA ACTAAACCTT CCGCAGGAGG ATATGCTGAA TGTGTTGATG AAATTACCGG AAGTGGTATC GCCTGCGACA GAACAGATCT CTGAAGAAGA GTGGCAGGAG GTGGAGAATG TGATCAGACA AGCGGTAGCT GATCTAGATG CACATCGTGC GGATGAAGGA AAGATGCTGT CAGCCGATCT GCTGTTGCGT ATAGAGAACA TAGGAACCTA TTGTGCAAAG GTGCGTGAAC TGGATCCGCT GCGTAAAGAC AAGGTACGTC AGCGTCTGGA AGCGCTGCTG GCAGAACATG TGGGTAAGGA AAATGTGGAT GAGAACCGTC TGGAGCAGGA GCTGATCTTT TATTTAGAGA AACTGGATAT CTCAGAAGAG CTGATAAGAC TGGAGAATCA CTGCCGCTAT TTCAAGGAAA TCCTGGCAGA CGGTGATCCG GGGAAAGGTA AAAAACTGGG ATTTGTATTG CAGGAAGTGG GTAGAGAGAT CAATACAACC GGTTCAAAAG CCAATGACGC CAGCATCCAG CAATGGGTGG TGTTGATGAA GGACGAACTG GAAAAGGCGA AAGAGCAGGT ATTGAATGTA TTGTAA
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Protein sequence | MLKSMTGFGR AEITKGETTI VVEVKSLNGK QFEVNLKISP LLKPYEFDIR NIMQQSLLRG TLDATVNIRQ NGATRPVVIN TDLAKYYHQS IKTLATELNL PQEDMLNVLM KLPEVVSPAT EQISEEEWQE VENVIRQAVA DLDAHRADEG KMLSADLLLR IENIGTYCAK VRELDPLRKD KVRQRLEALL AEHVGKENVD ENRLEQELIF YLEKLDISEE LIRLENHCRY FKEILADGDP GKGKKLGFVL QEVGREINTT GSKANDASIQ QWVVLMKDEL EKAKEQVLNV L
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