Gene Cpin_0676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0676 
Symbol 
ID8356788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp816489 
End bp817364 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content47% 
IMG OID644962828 
Producthypothetical protein 
Protein accessionYP_003120375 
Protein GI256419722 
COG category[S] Function unknown 
COG ID[COG1561] Uncharacterized stress-induced protein 
TIGRFAM ID[TIGR00255] conserved hypothetical protein TIGR00255 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.106933 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAAT CAATGACCGG CTTTGGAAGG GCGGAAATAA CCAAGGGGGA AACTACGATT 
GTTGTGGAAG TGAAATCGCT GAACGGGAAG CAGTTTGAGG TGAACCTTAA AATATCGCCA
TTACTAAAGC CTTATGAGTT TGACATCCGT AATATAATGC AGCAGTCTTT GTTGCGTGGT
ACATTGGATG CGACGGTAAA TATCAGGCAG AATGGAGCTA CGCGTCCGGT GGTAATCAAC
ACTGATCTTG CGAAGTATTA CCATCAGTCC ATCAAGACGC TGGCTACAGA ACTAAACCTT
CCGCAGGAGG ATATGCTGAA TGTGTTGATG AAATTACCGG AAGTGGTATC GCCTGCGACA
GAACAGATCT CTGAAGAAGA GTGGCAGGAG GTGGAGAATG TGATCAGACA AGCGGTAGCT
GATCTAGATG CACATCGTGC GGATGAAGGA AAGATGCTGT CAGCCGATCT GCTGTTGCGT
ATAGAGAACA TAGGAACCTA TTGTGCAAAG GTGCGTGAAC TGGATCCGCT GCGTAAAGAC
AAGGTACGTC AGCGTCTGGA AGCGCTGCTG GCAGAACATG TGGGTAAGGA AAATGTGGAT
GAGAACCGTC TGGAGCAGGA GCTGATCTTT TATTTAGAGA AACTGGATAT CTCAGAAGAG
CTGATAAGAC TGGAGAATCA CTGCCGCTAT TTCAAGGAAA TCCTGGCAGA CGGTGATCCG
GGGAAAGGTA AAAAACTGGG ATTTGTATTG CAGGAAGTGG GTAGAGAGAT CAATACAACC
GGTTCAAAAG CCAATGACGC CAGCATCCAG CAATGGGTGG TGTTGATGAA GGACGAACTG
GAAAAGGCGA AAGAGCAGGT ATTGAATGTA TTGTAA
 
Protein sequence
MLKSMTGFGR AEITKGETTI VVEVKSLNGK QFEVNLKISP LLKPYEFDIR NIMQQSLLRG 
TLDATVNIRQ NGATRPVVIN TDLAKYYHQS IKTLATELNL PQEDMLNVLM KLPEVVSPAT
EQISEEEWQE VENVIRQAVA DLDAHRADEG KMLSADLLLR IENIGTYCAK VRELDPLRKD
KVRQRLEALL AEHVGKENVD ENRLEQELIF YLEKLDISEE LIRLENHCRY FKEILADGDP
GKGKKLGFVL QEVGREINTT GSKANDASIQ QWVVLMKDEL EKAKEQVLNV L