Gene Cpin_0654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0654 
Symbol 
ID8356766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp793965 
End bp795401 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content46% 
IMG OID644962806 
ProductPpiC-type peptidyl-prolyl cis-trans isomerase 
Protein accessionYP_003120353 
Protein GI256419700 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0760] Parvulin-like peptidyl-prolyl isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0863502 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCTTA TTTTTTATTG GCTATTTTTG AAACTCACTG CACTTGTTAA CATGAATAGA 
ATTTTTGCAC TTTCTGCGGG TACACTACTA CTCTGTCAGG TAGCCGTTGC CCAACAGAAA
ATGGTAGCCG ATAAAATTGC GGCTATAGTG GGGGATAAGA TCATTCTCAG ATCCGACGTG
GAAGGAGAAA TGGTGAACCT GTCGCGTAAT AATGCGGATG GTTCTCTGCC TCCCAATGCA
CCATGTATGA TCATGGAACA GATCATTTCT CAGAAAGTAA TGGTGATGCA GGCAGAACGA
GACAGTTTGC CGGTAAGTGA ATCTGATGTA GATGGACAGA TCGAGAATCG TATCCGCTAC
TTCCAGGACG TTTACGGCAG CCCTGAGAAA ATGAAAGAAG TAACCGGCTA TTCTATTTAT
CAGCTGAAAG AACGCTTCCG TCAACCTATC AAAGAAGGTT TGCTGGCTAA AGCAATGCAG
GATAAAATCA CCAGTTCTGT AAAAGTGACG CCTTCCGAAG TAAAAAAATA CTTCGACGCC
ATCCCGAAAG ACAGTCTCCA GTACTACGAA TCAGAACTGG AAATCGGTCA GATCGTGATC
CAGCCGAAAG CGACCAAAGA AATGGACCAG TACGCCATCG ACCGCCTGCT GGAATTCAAA
AAACAGGTGC AGGAAAAAAC CAGTGACTTC GGTCGTCTCG CGATCCTCTA TTCAGAAGAT
CCGGGCGCAA AAGAAAATAA AGGGGTATAT ATCCTCAACC GTAACGACAA ACAGTGGGAT
GCTGACTTCC TGGCGGCGTC TTTCCGCCTG AAAGAGAATG AAATATCTTC TCCTATCAAA
AGTCAGTTTG GTTATCACCT TATTCAATGT ATCAAACGAC AGGGCGATAA CATTACCGTT
CAGCATATCC TGCTCAAGCC AAACGTTACC CGTAGCGACC TGGCTGACGC AACAAAACTG
CTGGACAGCG TTCGTACTGT TATCCTCAAC GGAAAAATGA CTTTCTCTGA AGCAGTAGTA
AAATACAGTA CCCTGCCGGC CGCTAAATTC GACGGTGGTA TGCTCCAGAA CAGAATGAAT
GGTACTACCT ACATCACTAT CGATCAGCTG GACGAACCTT CTGAAAGAGA CATCGTACTG
CTGCTCGACA CCCTGAAACC AGGTGGTATC TCTAAACCAA TGCCTTTCGT AGACGATCAG
CCAAACGGCC GTAATGGTGT ACGCCTTGTT TATCTGAAAA CCCGTACCCA GCCACACCGT
GAGAATATGA ACGACGACTA CGCCCGTATC CAGCAACGTA CGCTTCAGCT GAAACAGCAG
GATGCCCGCG ACAAATGGCT GCGTGAAAAG ATCCCGACAT ATTATATCCA TGTTGATGAT
GAGTTCAGAA ACTGTACACA CATCAGTCAG TGGATAGGAG GTATAGCAAA ACAATAA
 
Protein sequence
MRLIFYWLFL KLTALVNMNR IFALSAGTLL LCQVAVAQQK MVADKIAAIV GDKIILRSDV 
EGEMVNLSRN NADGSLPPNA PCMIMEQIIS QKVMVMQAER DSLPVSESDV DGQIENRIRY
FQDVYGSPEK MKEVTGYSIY QLKERFRQPI KEGLLAKAMQ DKITSSVKVT PSEVKKYFDA
IPKDSLQYYE SELEIGQIVI QPKATKEMDQ YAIDRLLEFK KQVQEKTSDF GRLAILYSED
PGAKENKGVY ILNRNDKQWD ADFLAASFRL KENEISSPIK SQFGYHLIQC IKRQGDNITV
QHILLKPNVT RSDLADATKL LDSVRTVILN GKMTFSEAVV KYSTLPAAKF DGGMLQNRMN
GTTYITIDQL DEPSERDIVL LLDTLKPGGI SKPMPFVDDQ PNGRNGVRLV YLKTRTQPHR
ENMNDDYARI QQRTLQLKQQ DARDKWLREK IPTYYIHVDD EFRNCTHISQ WIGGIAKQ