| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0652 |
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| Symbol | nusA |
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| ID | 8356764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 788938 |
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| End bp | 790185 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644962804 |
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| Product | transcription elongation factor NusA |
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| Protein accession | YP_003120351 |
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| Protein GI | 256419698 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.020983 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.100842 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAGTA TTAACCTGAT TGAGTCATTC ACGGAGTTTA AAGAGGCGGA GAACATTGAC
CGCCCGACGT TGATGAAAGT GTTGGAAGAT GTGTTCAAAA CTCTTCTCCG TAAAAAGTAT
GGCTCTGATG AGAACTTTGA CGTGATTGTA AATACTGAGA AGGGTGACCT GGAAATTTTA
CGCCGCCGTA CCATTGTAAC AGATGGAGAG GTAGAAGATG ATAATGCCCA GATCGCTTAT
TCGGAAGCCA TTTTAGTTGA ACCAGACTAC CAGGTAGGTG AAGACCTTTA TGAGGAAGTA
GAGATCCTGG ATTTCGGCCG CAGGGCCATC CTGGCTGCAA AGCAGACTCT TTCTGCCCGT
ATCGGAGACC TTAAAAAGAA TATACTTGTC AAGAAATATG CTGACCGTGT CGGTGAAATT
GTAACCGGTG AAGTGTACCA GGTATGGAAA AAAGAAGTTT TATTGCTTGA TGATGAAAGG
AATGAGTTAA TTTTACCTAA ATCTGAACAA ATTCCTACCG ATTATTTCAA GAAAGGTGAA
AATGTAAGGG CAGTAGTTAA AAAAGTGGAG ATGAAGAATA ATGCTCCGCT CATCATACTA
TCCCGCACCC ATCCTACCTT CCTGGCTAAA TTGCTGGAAA TTGAAGTTCC GGAGATCTTT
GACGGCCTTA TCGTAATTAA GAAAATCGTG CGCGAACCTG GAGAAAGAGC TAAAGTAGCT
GTGGAGTCTT ATGACGACCG CATCGACCCT GTAGGTGCCT GCGTGGGTAT GAAAGGTAGT
CGTATTCACG GCATTGTGCG TGAACTGCGT AACGAGAACA TAGATATCAT TAACTATACC
GCTAATATTC AGCTGCTTAT CCAGCGTGCG CTCACGCCAG CAAGGATCAG CCGTATGGAG
GTAGATAATG AGAATAAATA TGCTTCTGTT TTCCTCAAGG CAGATCAGGT ATCTCTGGCA
ATCGGTAAGA AAGGCGTCAA TATAAAACTG GCCTGCGAAT TGACAGGTTA TGAGATTGAT
GTCTTCCGTG ATGAGGAACA GGAACAGGCC GAATACGACA TTGACCTGGC AGAATTCTCT
GACGAGATCG AAGAATGGGT ACTGGATGAA CTCAAACGTA TTGGTTGTGA CACTGCCCGC
AGTGTACTTG ACCTGACAGT AGAGGAACTG GTACGCCGCT CAGACCTTGA AGAGGAAACA
GTAAAAGACA TAAGAAGAAT ACTACAGGAA GAATTTGATA AAGAGTAG
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| Protein sequence | MASINLIESF TEFKEAENID RPTLMKVLED VFKTLLRKKY GSDENFDVIV NTEKGDLEIL
RRRTIVTDGE VEDDNAQIAY SEAILVEPDY QVGEDLYEEV EILDFGRRAI LAAKQTLSAR
IGDLKKNILV KKYADRVGEI VTGEVYQVWK KEVLLLDDER NELILPKSEQ IPTDYFKKGE
NVRAVVKKVE MKNNAPLIIL SRTHPTFLAK LLEIEVPEIF DGLIVIKKIV REPGERAKVA
VESYDDRIDP VGACVGMKGS RIHGIVRELR NENIDIINYT ANIQLLIQRA LTPARISRME
VDNENKYASV FLKADQVSLA IGKKGVNIKL ACELTGYEID VFRDEEQEQA EYDIDLAEFS
DEIEEWVLDE LKRIGCDTAR SVLDLTVEEL VRRSDLEEET VKDIRRILQE EFDKE
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