| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0649 |
|---|
| Symbol | |
|---|
| ID | 8356761 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 787609 |
|---|
| End bp | 787959 |
|---|
| Gene Length | 351 bp |
|---|
| Protein Length | 116 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644962801 |
|---|
| Product | TM2 domain containing protein |
|---|
| Protein accession | YP_003120348 |
|---|
| Protein GI | 256419695 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000194535 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.126173 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGACT ATGCATTCTC CTCCCTTCCC GGCATTGAGC AGGAAGAGCT CTTATGGCTA
CAGGAACTGA CCAGAAATTA CTCTGCCGAA AACCGCCAGC GTTTTCTGGC CATCTACCAG
GGTCGCCGTA AAGAACCTTC CCTGATACTG ATCTGCTGCC TTATCGGACT CGTAGGCGCT
GCCGGTATTC ACCGCTTTAT CCTGAACCAG ATCGGATTGG GTATACTCTA CTTTCTGACA
GGTGGTCTCT GTGTGGTGGG TACTATTGTG GATGCGATCA ATCACCGTAA ATTAGCATGG
GAGTACAACA AAAAGGCTGC GCTCGAAAGC GCGGCACTCC TTGGCCTATA A
|
|---|
| Protein sequence | MNDYAFSSLP GIEQEELLWL QELTRNYSAE NRQRFLAIYQ GRRKEPSLIL ICCLIGLVGA
AGIHRFILNQ IGLGILYFLT GGLCVVGTIV DAINHRKLAW EYNKKAALES AALLGL
|
|---|
| |