Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0640 |
Symbol | |
ID | 8356751 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 779631 |
End bp | 780506 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644962791 |
Product | NmrA family protein |
Protein accession | YP_003120339 |
Protein GI | 256419686 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.698851 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTAAAA TACTAGTGAC AGGCGTAACA GGACATCTTG GTCGTGCCGT ATTAGATAAA CTGCTGGTAA AAGTGCCGGC ATCAAATGTG AAAGTCCTGG TTCGCGATGC GGCCAAAGCG GAGGCATTCA AACCACTGGG CGTAGAGATC GCCATAGGCA GTTATGACGA CAAAGCATCC CTGGTGGCTG CTTTTCAGGA TACAGACAAA CTGTATTTCG TATCCGGCAA TGACGTGGCG AATCGCGGTC CGCAGCATGA AAACGTAGTC AATGCTGCTA TTGCTGCCAA AGTAGGCCAT GTAGTCTACA CCAGCGTACA GCGTAAGAGC GAATCCGCGA CTTCTTCGCT GGCATTTATA GCATCAACTC ACCTGTTGGT AGAAAACCTG CTGAAAGCTT CCGGTCTGCA ATATACCATT ATGGAGCATG GCTTATATGC TGAGGTGATT CCGATGTTTG TAGGAGACAG AGTACTGGAA ACTGGCATTA TCTTCCAGCC TGCAGGAGCC GGCAAAACGG CTTACGCATT ACGCGAAGAT ATGGCAGAAG CCGGCGTAGC CGTACTGACA GGAGAGGGGC ATGAAAACCG TAATTATGTG ATCACGGGTT CAAAAGCAAT CTCTTATACA GACATCGCAG CAGCCATTAG TGCAGCTACC GGCAAACAGG TGACTTATGT ATCTCCAACT GTGGAAGCAT TTAAAGAGGA ACTGACCAAA GTAGGTGTGC CGGAGATGTA TATTGGTTTG TTTGCAGGCT TCAGTACAGC TGTTAAAGAG GGCGAATTTG AAGAAGTGAG CGGTGATCTG GAAAAACTGA TCGGTCGTAA GAGCGGCAGT GTAGAGGCGT ATCTGAAAGA GACATACGGC AAATAG
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Protein sequence | MGKILVTGVT GHLGRAVLDK LLVKVPASNV KVLVRDAAKA EAFKPLGVEI AIGSYDDKAS LVAAFQDTDK LYFVSGNDVA NRGPQHENVV NAAIAAKVGH VVYTSVQRKS ESATSSLAFI ASTHLLVENL LKASGLQYTI MEHGLYAEVI PMFVGDRVLE TGIIFQPAGA GKTAYALRED MAEAGVAVLT GEGHENRNYV ITGSKAISYT DIAAAISAAT GKQVTYVSPT VEAFKEELTK VGVPEMYIGL FAGFSTAVKE GEFEEVSGDL EKLIGRKSGS VEAYLKETYG K
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