Gene Cpin_0640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0640 
Symbol 
ID8356751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp779631 
End bp780506 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content48% 
IMG OID644962791 
ProductNmrA family protein 
Protein accessionYP_003120339 
Protein GI256419686 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.698851 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTAAAA TACTAGTGAC AGGCGTAACA GGACATCTTG GTCGTGCCGT ATTAGATAAA 
CTGCTGGTAA AAGTGCCGGC ATCAAATGTG AAAGTCCTGG TTCGCGATGC GGCCAAAGCG
GAGGCATTCA AACCACTGGG CGTAGAGATC GCCATAGGCA GTTATGACGA CAAAGCATCC
CTGGTGGCTG CTTTTCAGGA TACAGACAAA CTGTATTTCG TATCCGGCAA TGACGTGGCG
AATCGCGGTC CGCAGCATGA AAACGTAGTC AATGCTGCTA TTGCTGCCAA AGTAGGCCAT
GTAGTCTACA CCAGCGTACA GCGTAAGAGC GAATCCGCGA CTTCTTCGCT GGCATTTATA
GCATCAACTC ACCTGTTGGT AGAAAACCTG CTGAAAGCTT CCGGTCTGCA ATATACCATT
ATGGAGCATG GCTTATATGC TGAGGTGATT CCGATGTTTG TAGGAGACAG AGTACTGGAA
ACTGGCATTA TCTTCCAGCC TGCAGGAGCC GGCAAAACGG CTTACGCATT ACGCGAAGAT
ATGGCAGAAG CCGGCGTAGC CGTACTGACA GGAGAGGGGC ATGAAAACCG TAATTATGTG
ATCACGGGTT CAAAAGCAAT CTCTTATACA GACATCGCAG CAGCCATTAG TGCAGCTACC
GGCAAACAGG TGACTTATGT ATCTCCAACT GTGGAAGCAT TTAAAGAGGA ACTGACCAAA
GTAGGTGTGC CGGAGATGTA TATTGGTTTG TTTGCAGGCT TCAGTACAGC TGTTAAAGAG
GGCGAATTTG AAGAAGTGAG CGGTGATCTG GAAAAACTGA TCGGTCGTAA GAGCGGCAGT
GTAGAGGCGT ATCTGAAAGA GACATACGGC AAATAG
 
Protein sequence
MGKILVTGVT GHLGRAVLDK LLVKVPASNV KVLVRDAAKA EAFKPLGVEI AIGSYDDKAS 
LVAAFQDTDK LYFVSGNDVA NRGPQHENVV NAAIAAKVGH VVYTSVQRKS ESATSSLAFI
ASTHLLVENL LKASGLQYTI MEHGLYAEVI PMFVGDRVLE TGIIFQPAGA GKTAYALRED
MAEAGVAVLT GEGHENRNYV ITGSKAISYT DIAAAISAAT GKQVTYVSPT VEAFKEELTK
VGVPEMYIGL FAGFSTAVKE GEFEEVSGDL EKLIGRKSGS VEAYLKETYG K