Gene Cpin_0637 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0637 
Symbol 
ID8356748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp774967 
End bp777840 
Gene Length2874 bp 
Protein Length957 aa 
Translation table11 
GC content47% 
IMG OID644962788 
ProductPeptidase M1 membrane alanine aminopeptidase 
Protein accessionYP_003120336 
Protein GI256419683 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0308] Aminopeptidase N 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCCAC GATTCCTACT CCTTGTCTGT TTACTCCTGA ATGCTCTGCC GATCTTCAGC 
CAGGACCGGT TTATTATCAT CAGCGGTATC ATTACAGACG CGACCACACA TCAACCTATT
CCGTCCGCCA ACATCCGGCT GAAGCATAGC AGCACAGGTA CCATCAGCAA TAACCTGGGT
ACCTTTACTT TCAAGATACC CGAACACCCG GTAGCAGATA GTGTACTGAT CTCCTGTATC
GGTTACCGCT CCGTGACCAG ACTATTCACC ACCACTGACC AACAGGTAGA GATCGGACTC
ACACCTGCTG TCATCTCCTT GCCGGAAGTG GCGATCCATT TGAAAAGCGG ACTGGAGATA
CTGCAAAAGG CGATTGCTGC AATTCCTCAA AACTATGATA CTACCGATAC CCGGATGACA
GCTTTTTACC GGGAGGATAT TCACTTTGAT AATGATACCC TTAACTATAA CGAATCCGTA
TTAGAGGTCT TCAAGACTTT TCGCAGAGAT AAAGAACACC GCGACCAGAT AAGGATTATC
AAAGGCCGGA AAATACCTTC TCCTCCTAAT AATGATCCGC AATTCTATGG ATGGATCGGT
AATATTACGA ATACGGCCTA TAGCTCGCTG AGAGAAGATA TCATCAAATA CAACAATGTC
AAAAACAGTA TCCTGGCGCC GCAAAATTTT CGCTATTACA ATTACACCCT GGCAGAAACG
ATCGCAGAGG ATGATCGTCA GTTGCTGGTT ATCCGGATCA CGCCTAAGAA AAACACCAGA
AAAGGGATTA TAAAGGGGAC TATTTATATC GACGAGGCAA CGCTGGCAAT GGTCAGATTT
GAAATGGAAA CGACCCCTGC GGGGAACGAT TATATCAACA AACATGGGAA AGGTGGTCTC
CGGTATACAA TCATGTCCAA AGTAGTCGGT GGTACCCTGG ATTTTACGGG CATTAAAATG
ACGATCAGTT ATCAGGCTTT CCAGGGCAAG TATTACCTGC AGACTGTATT ACGGCATTGG
GATGTGGTCA TTAACAGCCG GAAAAGAAAT CTCAGCGATG TTCCATGGAC CGGGGATTTC
AATTTCCTGG TCACCGGTAT CGACAAGGAT AGTGTACAGC AGTTTCAGAC AGGTGTCAGC
AGTCATCAGA ATTCTATGAA TAACCTCATT GGCAGCAATT ACGATGCGGC CTTCTGGGAG
AACTATAATA TCCTGCAGCC GGAATTACCT GACTCTGTGA AAGGGGCTCC TCCCGTTGTG
AAAGTAGTCA GGAAAGTCCC AAATCGTCAG AATGGTTTTA CCAGGGCAGA TACCCTCCGC
GGACAGCTCT CTCCGCTCCG CTCCTGTTAC GATGTGACCT TTTACGATCT TGATGTGGAT
GTTGATCTGG AGCGGCATTT TCTGAAAGGA AATAACAAGA TCAGGTATAA GGTGCAGCAA
GCCTTTGACA GGATGCAGAT AGATCTGTAT GCGAACATGC AGATTGAACG GATCCTGTAT
AAAGGTCAGC CTTTGCCATA CACGCGGGAA TATGATGCGG TCTTTGTGCA ATTTCCCGAA
AGACAGACTC CTGGCAATAC CGGCGAAATC ACCATTTACT ACGAAGGCAC GCCCCAGGTA
CCGGATAAAA GTATACCCAT GAATGGCGGC GTATTATGGG ATAAGGACGA AAAAGGGAAT
CCCTGGGCGC AGGTAGTATG CCAGGGCTCT GGTGCTAGTC TGTGGTGGCC CTGTAAAGAT
CATTTGTCAG ACGAACCGGA CAGTATGCAT ATCTCGATCA CGGTACCCAA TGGCTATACT
GAAATCTCCA ATGGACGATT ACTGCAAAAA GTTCCTGTCG GCAATACAAA GACCCGCTTT
GAATGGTCGG TAACTTATCC GATCAACAAT TACAACGCTA CGTTCTGTAT CGGGAAGTAT
GCGCACTATA CTGACCTGTA TGTGGGCGCT GACAGTCTCA CCATCGACTA CTACGTGATG
CCCTATAATC TTGAGGCAGG AAAGCGGCTT TTCGCCAAAG TAAAACAGAT GCTGGCCTGT
TATGAGGAAA ACTTTGGTCC TTATGCCTTC CGGCGGGATG GATTTACGCT GCTGGAAAGC
CCCTACCCTA TGGAACACCA GAGTGGTGTC TGTATCGGGA AGATCAACCG GAACCAGGTG
CCGGAAATGC CGGCTTTGGT ATGGCATGAA GCTGCCCATG AATGGTGGGG AAACGCGATC
AGTTGTAAGG ATATGGCAGA TATGTGGATG CATGAGGCAT TTGCTACTTA TGCGGAATCT
TTGGTGGTAG AGGACTTATT TGATAAACAG CTGGCATCTA CTTATCTGAA TGACCAGAAA
GAGGGTGTTG GCAATAGGGA GCCGATCATC GGGGTGTATG ACGTGAACCA CATTTTCTAT
GACATCAATG ACATGTATAC CAAAGGTAGC CTGATGCTGC ATACTTTCCG GAATGTACTG
CACAATGACA CTCTCTGGTT TGATCTGCTC AGAGGTATCC AGCAGCATTT CCGGTACCAG
ACGCTTTCTT CGGATAACCT GATCAGCTAC ATCAACCAGT TTACAAAACA TGATTACAGT
GCTTTTTTCA ACCAATACCT GAAGTACACA CATCTGCCCC GGCTGGAATA CAGTCTGCAG
GAACAGGGAA ATAACCTGCT GCTCAGATAC CGTTGGGAGG CAGATGTACC TGATTTTAGT
ATGCCTGTGA AAGTGACAAC CGCCAGGGAA CAGCTGAGGT TTATCCACCC TACCTGCTCC
TGGAAAACGC TGACGCTGAA AAATATGAAA GCAGGAGATT TTGAAGTGGA TGAGGAGCAT
TTTCTCATAG ATGTCATTGA GCTGGATGGA GGCCGGACCT CGTTCGTTGA ATAA
 
Protein sequence
MYPRFLLLVC LLLNALPIFS QDRFIIISGI ITDATTHQPI PSANIRLKHS STGTISNNLG 
TFTFKIPEHP VADSVLISCI GYRSVTRLFT TTDQQVEIGL TPAVISLPEV AIHLKSGLEI
LQKAIAAIPQ NYDTTDTRMT AFYREDIHFD NDTLNYNESV LEVFKTFRRD KEHRDQIRII
KGRKIPSPPN NDPQFYGWIG NITNTAYSSL REDIIKYNNV KNSILAPQNF RYYNYTLAET
IAEDDRQLLV IRITPKKNTR KGIIKGTIYI DEATLAMVRF EMETTPAGND YINKHGKGGL
RYTIMSKVVG GTLDFTGIKM TISYQAFQGK YYLQTVLRHW DVVINSRKRN LSDVPWTGDF
NFLVTGIDKD SVQQFQTGVS SHQNSMNNLI GSNYDAAFWE NYNILQPELP DSVKGAPPVV
KVVRKVPNRQ NGFTRADTLR GQLSPLRSCY DVTFYDLDVD VDLERHFLKG NNKIRYKVQQ
AFDRMQIDLY ANMQIERILY KGQPLPYTRE YDAVFVQFPE RQTPGNTGEI TIYYEGTPQV
PDKSIPMNGG VLWDKDEKGN PWAQVVCQGS GASLWWPCKD HLSDEPDSMH ISITVPNGYT
EISNGRLLQK VPVGNTKTRF EWSVTYPINN YNATFCIGKY AHYTDLYVGA DSLTIDYYVM
PYNLEAGKRL FAKVKQMLAC YEENFGPYAF RRDGFTLLES PYPMEHQSGV CIGKINRNQV
PEMPALVWHE AAHEWWGNAI SCKDMADMWM HEAFATYAES LVVEDLFDKQ LASTYLNDQK
EGVGNREPII GVYDVNHIFY DINDMYTKGS LMLHTFRNVL HNDTLWFDLL RGIQQHFRYQ
TLSSDNLISY INQFTKHDYS AFFNQYLKYT HLPRLEYSLQ EQGNNLLLRY RWEADVPDFS
MPVKVTTARE QLRFIHPTCS WKTLTLKNMK AGDFEVDEEH FLIDVIELDG GRTSFVE