Gene Cpin_0629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0629 
Symbol 
ID8356740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp765318 
End bp766040 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content46% 
IMG OID644962780 
Producthypothetical protein 
Protein accessionYP_003120328 
Protein GI256419675 
COG category 
COG ID 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCATAC GGAAAACCCG CTCCGTGGCC AGTAATGGTA AGGAGGAAGG TATTGCCATG 
CCCAATGTAC ATCGTCGTAC TTTTCTCAAA TACGCTGGTA TGGGAGCTAT GGGAGCTGCT
GTTATTACCG CCGGATCATT AGCTGGCTGT AGCAGTGAAG ATGGCGGTGG TGATGTTGCT
CCAGGTACAG GAGTAAGTCT AGGTAGCGGT GACTTTGCAG TGTTAAATTA TGCCTTTGCA
TTAGAACAAC TGGAAGCAGC CTTTTATACG CAGGTAGTAG CAACTCCGTA CACAGGTATT
TCAGATGTGG AACGCATCTT CCTCACCGAC ATCCGGAATC ATGAAATAGC GCACAGAGAA
TTTTTCCGTA AAGCGCTTGG AACAAATGCA ATACCTAATC TGACAGTAGA TTTCTCCACC
ATTGATTTTA CCAGCAGGGA TAAAGTACTC GCTGCTGCAA AAACCTTCGA AGATCTGGGT
GTTGCAGCCT ATAACGGAGC AGGGAAATTT ATCACTACCC CCAACTATCT GGTGCTCGCC
GGTAAAATAG TATCTGTTGA AGCAAGACAT GCCGCATTGA TCAGGGACCT TATCAGTAAC
GGTTCTTTCG CATCTGATGC AGATGCCAAC GGATTAGATT TTGCGAAAAC GCCGCAGGAT
GTATTTGCGG CAGCAAAGGT GTATATCAAG ACAGAGATCG ACACTAATAC GTTGCCGAAA
TAA
 
Protein sequence
MFIRKTRSVA SNGKEEGIAM PNVHRRTFLK YAGMGAMGAA VITAGSLAGC SSEDGGGDVA 
PGTGVSLGSG DFAVLNYAFA LEQLEAAFYT QVVATPYTGI SDVERIFLTD IRNHEIAHRE
FFRKALGTNA IPNLTVDFST IDFTSRDKVL AAAKTFEDLG VAAYNGAGKF ITTPNYLVLA
GKIVSVEARH AALIRDLISN GSFASDADAN GLDFAKTPQD VFAAAKVYIK TEIDTNTLPK