Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0629 |
Symbol | |
ID | 8356740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 765318 |
End bp | 766040 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644962780 |
Product | hypothetical protein |
Protein accession | YP_003120328 |
Protein GI | 256419675 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCATAC GGAAAACCCG CTCCGTGGCC AGTAATGGTA AGGAGGAAGG TATTGCCATG CCCAATGTAC ATCGTCGTAC TTTTCTCAAA TACGCTGGTA TGGGAGCTAT GGGAGCTGCT GTTATTACCG CCGGATCATT AGCTGGCTGT AGCAGTGAAG ATGGCGGTGG TGATGTTGCT CCAGGTACAG GAGTAAGTCT AGGTAGCGGT GACTTTGCAG TGTTAAATTA TGCCTTTGCA TTAGAACAAC TGGAAGCAGC CTTTTATACG CAGGTAGTAG CAACTCCGTA CACAGGTATT TCAGATGTGG AACGCATCTT CCTCACCGAC ATCCGGAATC ATGAAATAGC GCACAGAGAA TTTTTCCGTA AAGCGCTTGG AACAAATGCA ATACCTAATC TGACAGTAGA TTTCTCCACC ATTGATTTTA CCAGCAGGGA TAAAGTACTC GCTGCTGCAA AAACCTTCGA AGATCTGGGT GTTGCAGCCT ATAACGGAGC AGGGAAATTT ATCACTACCC CCAACTATCT GGTGCTCGCC GGTAAAATAG TATCTGTTGA AGCAAGACAT GCCGCATTGA TCAGGGACCT TATCAGTAAC GGTTCTTTCG CATCTGATGC AGATGCCAAC GGATTAGATT TTGCGAAAAC GCCGCAGGAT GTATTTGCGG CAGCAAAGGT GTATATCAAG ACAGAGATCG ACACTAATAC GTTGCCGAAA TAA
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Protein sequence | MFIRKTRSVA SNGKEEGIAM PNVHRRTFLK YAGMGAMGAA VITAGSLAGC SSEDGGGDVA PGTGVSLGSG DFAVLNYAFA LEQLEAAFYT QVVATPYTGI SDVERIFLTD IRNHEIAHRE FFRKALGTNA IPNLTVDFST IDFTSRDKVL AAAKTFEDLG VAAYNGAGKF ITTPNYLVLA GKIVSVEARH AALIRDLISN GSFASDADAN GLDFAKTPQD VFAAAKVYIK TEIDTNTLPK
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