Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0625 |
Symbol | |
ID | 8356736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 761976 |
End bp | 762749 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644962776 |
Product | thiazole biosynthesis family protein |
Protein accession | YP_003120324 |
Protein GI | 256419671 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2022] Uncharacterized enzyme of thiazole biosynthesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACACCTC TCGTTATAGC AGGACATACC TTTTCCTCAC GGCTGTTTAC AGGTACGGGT AAATTCTCTT CCCCTGGTAT CATGGAAGCG GCCTTACTGG AATCGGGCTC CGAATTGGTT ACCGTAGCAT TGAAAAGGGT AGATGTGCAT AACCAGTCAG ACGACATGCT GCAACATGTA CATCATCCGC AGTTAAAACT ATTGCCCAAT ACTTCCGGAG TAAGAACAGC AAAAGAAGCT GTTTACGCAG CACAACTGGC CAGGGAAGCA CTGGAAACAA ACTGGCTGAA GCTGGAGATA CATCCTGATC CCCGGTATTT ACTTCCCGAT CCGATAGAAA CGCTGAAAGC AGCAGAAGAG CTGGTAAAAC TCGGTTTTAT CGTATTGCCT TATGTACATG CCGACCCGGT GCTTTGTAAG CGGCTGGAAG AAGCAGGTAC GGCGGCAGTG ATGCCGCTTG GTGCACCGAT AGGTAGTAAT AAAGGTCTGA AAACAATCGA CTTTTTAGAG ATCATCATTG AACAGAGTAA TGTACCTGTC GTGGTGGACG CCGGTATTGG CAGTCCGTCG GATGCGGCAA AAGCCATGGA GATCGGTGCG GATGCCGTGC TGGTCAACAC AGCTATTGCG GTGGCAAAAG ACCCGGTATT GATGGCGCGT GCTTTCAGAC AGGCTGTAAT TGCCGGCAGA CAAGCCTATG AAGCAGGACT CCCTGCCGTA CGCCGGGAAG CAGTAGCTTC CAGTCCGCTG ACAGGTTTCC TTGATGAAGT ATAA
|
Protein sequence | MTPLVIAGHT FSSRLFTGTG KFSSPGIMEA ALLESGSELV TVALKRVDVH NQSDDMLQHV HHPQLKLLPN TSGVRTAKEA VYAAQLAREA LETNWLKLEI HPDPRYLLPD PIETLKAAEE LVKLGFIVLP YVHADPVLCK RLEEAGTAAV MPLGAPIGSN KGLKTIDFLE IIIEQSNVPV VVDAGIGSPS DAAKAMEIGA DAVLVNTAIA VAKDPVLMAR AFRQAVIAGR QAYEAGLPAV RREAVASSPL TGFLDEV
|
| |