Gene Cpin_0625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0625 
Symbol 
ID8356736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp761976 
End bp762749 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content50% 
IMG OID644962776 
Productthiazole biosynthesis family protein 
Protein accessionYP_003120324 
Protein GI256419671 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2022] Uncharacterized enzyme of thiazole biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACCTC TCGTTATAGC AGGACATACC TTTTCCTCAC GGCTGTTTAC AGGTACGGGT 
AAATTCTCTT CCCCTGGTAT CATGGAAGCG GCCTTACTGG AATCGGGCTC CGAATTGGTT
ACCGTAGCAT TGAAAAGGGT AGATGTGCAT AACCAGTCAG ACGACATGCT GCAACATGTA
CATCATCCGC AGTTAAAACT ATTGCCCAAT ACTTCCGGAG TAAGAACAGC AAAAGAAGCT
GTTTACGCAG CACAACTGGC CAGGGAAGCA CTGGAAACAA ACTGGCTGAA GCTGGAGATA
CATCCTGATC CCCGGTATTT ACTTCCCGAT CCGATAGAAA CGCTGAAAGC AGCAGAAGAG
CTGGTAAAAC TCGGTTTTAT CGTATTGCCT TATGTACATG CCGACCCGGT GCTTTGTAAG
CGGCTGGAAG AAGCAGGTAC GGCGGCAGTG ATGCCGCTTG GTGCACCGAT AGGTAGTAAT
AAAGGTCTGA AAACAATCGA CTTTTTAGAG ATCATCATTG AACAGAGTAA TGTACCTGTC
GTGGTGGACG CCGGTATTGG CAGTCCGTCG GATGCGGCAA AAGCCATGGA GATCGGTGCG
GATGCCGTGC TGGTCAACAC AGCTATTGCG GTGGCAAAAG ACCCGGTATT GATGGCGCGT
GCTTTCAGAC AGGCTGTAAT TGCCGGCAGA CAAGCCTATG AAGCAGGACT CCCTGCCGTA
CGCCGGGAAG CAGTAGCTTC CAGTCCGCTG ACAGGTTTCC TTGATGAAGT ATAA
 
Protein sequence
MTPLVIAGHT FSSRLFTGTG KFSSPGIMEA ALLESGSELV TVALKRVDVH NQSDDMLQHV 
HHPQLKLLPN TSGVRTAKEA VYAAQLAREA LETNWLKLEI HPDPRYLLPD PIETLKAAEE
LVKLGFIVLP YVHADPVLCK RLEEAGTAAV MPLGAPIGSN KGLKTIDFLE IIIEQSNVPV
VVDAGIGSPS DAAKAMEIGA DAVLVNTAIA VAKDPVLMAR AFRQAVIAGR QAYEAGLPAV
RREAVASSPL TGFLDEV