Gene Cpin_0611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0611 
Symbol 
ID8356722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp749372 
End bp749983 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content43% 
IMG OID644962762 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003120310 
Protein GI256419657 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGTCA AAGACCGGAT TTTGGAAACA GCGCTCAGGA TGTTCAGAAT GTACGGCATT 
AAGAGTGTAA CAATGTTTGA TATATCGAGA GAGAGCGGAG TGTCAAAGAA AACGGTATAC
GAACATTTCA GGGACAAAGA AGAACTGGTG CAGGAAGGTA TAAGAACCAT GCTGAACGGT
CACGGACAGC ATCTCGAAGA TTTTCGCCAG CAATCTGCTA ACGCTATCGA GGAACTACTG
AAAGAGGTGA AATACATGGA GGAAATGGGT AACACCATCA ACCCTGTCAT GTTATATGAA
ATGCAGAAAT ACCATCCTGA TCTCTGGCTG GAAGTGGAAA CGTTCAAGAA AGATCATCTG
ATACGTGCCA TTACCGCCAA TCTCGAAAGA GGAATACAGG AAGGATGTTA CCGCAACGAT
TTTAAGCTGA ATATCATGGC TCGTATGCGA TTATTACAAC TGGAAACGGT TTTTCAGCCG
GCACTGTTTC CCGCTACAGA GTTCAGTATG CCTGAAGTCA TCAGGGAAAT AACAGCGCAT
TTCTTACTCG GTATAGCCAC CGCAGAAGGA CGTAAACTAG TAGCAGAATA TCTACAAATT
AAAGAAGACT AA
 
Protein sequence
MPVKDRILET ALRMFRMYGI KSVTMFDISR ESGVSKKTVY EHFRDKEELV QEGIRTMLNG 
HGQHLEDFRQ QSANAIEELL KEVKYMEEMG NTINPVMLYE MQKYHPDLWL EVETFKKDHL
IRAITANLER GIQEGCYRND FKLNIMARMR LLQLETVFQP ALFPATEFSM PEVIREITAH
FLLGIATAEG RKLVAEYLQI KED