Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0611 |
Symbol | |
ID | 8356722 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 749372 |
End bp | 749983 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644962762 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003120310 |
Protein GI | 256419657 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGTCA AAGACCGGAT TTTGGAAACA GCGCTCAGGA TGTTCAGAAT GTACGGCATT AAGAGTGTAA CAATGTTTGA TATATCGAGA GAGAGCGGAG TGTCAAAGAA AACGGTATAC GAACATTTCA GGGACAAAGA AGAACTGGTG CAGGAAGGTA TAAGAACCAT GCTGAACGGT CACGGACAGC ATCTCGAAGA TTTTCGCCAG CAATCTGCTA ACGCTATCGA GGAACTACTG AAAGAGGTGA AATACATGGA GGAAATGGGT AACACCATCA ACCCTGTCAT GTTATATGAA ATGCAGAAAT ACCATCCTGA TCTCTGGCTG GAAGTGGAAA CGTTCAAGAA AGATCATCTG ATACGTGCCA TTACCGCCAA TCTCGAAAGA GGAATACAGG AAGGATGTTA CCGCAACGAT TTTAAGCTGA ATATCATGGC TCGTATGCGA TTATTACAAC TGGAAACGGT TTTTCAGCCG GCACTGTTTC CCGCTACAGA GTTCAGTATG CCTGAAGTCA TCAGGGAAAT AACAGCGCAT TTCTTACTCG GTATAGCCAC CGCAGAAGGA CGTAAACTAG TAGCAGAATA TCTACAAATT AAAGAAGACT AA
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Protein sequence | MPVKDRILET ALRMFRMYGI KSVTMFDISR ESGVSKKTVY EHFRDKEELV QEGIRTMLNG HGQHLEDFRQ QSANAIEELL KEVKYMEEMG NTINPVMLYE MQKYHPDLWL EVETFKKDHL IRAITANLER GIQEGCYRND FKLNIMARMR LLQLETVFQP ALFPATEFSM PEVIREITAH FLLGIATAEG RKLVAEYLQI KED
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