Gene Cpin_0606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0606 
Symbol 
ID8356717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp741231 
End bp742142 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content46% 
IMG OID644962757 
ProductNUDIX hydrolase 
Protein accessionYP_003120305 
Protein GI256419652 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.140446 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.376937 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACGC TAAGGCCTAC AGGAGTAATA ATAGCAAGGT TCCAGACACC TTCCCTGCAC 
GAAGGGCATC TGCAACTGAT CAAAGAAGTA AAAGCCAAAC ATAACAGGCT GATCATCGTA
CTTGGCGTTA GCCCGATCAA GGGTGGCCGT AAAAACCCGC TGGATTATTA TACCCGCGAA
CGCATGATCA AAAAGTTGTT TCCGGAAGTA ATTGTGCTGC CTTTAAGCGA TCAGCCTTCT
GATAAAGGAT GGTCTCGTAA ACTGGACGAA ATGCTCAGCA ATAACTTCAA TAACGAAACA
TTCATCCTGT ACGGCAGCCG CGATAGTTTC ATTCCATTCT ATTCCGGTCG TTTCCCAACA
GCGGACTTAC CCCCGGTTCA GGATTTTAAT GCCACCGCCC AAAGAGAAGC GATCTCCGAT
AAAGTGTTTG ATACAGAAGA ATTCCGTGCC GGTATCATCT ACAGTACATA TAACCTGTAT
CCGAAAGTAT ATCCGACTGT TGATATCGCA TTATTCCGTA ACAACCGCAG CGAACTGCTT
CTCGGCCGTA AATCAGCAGA AAGCGGATGG CGCCTGCCCG GTGGCTTTAC CGATCCCGGA
GATATGAGCT TCGATATCGC TGCCAAAAGA GAATTACTGG AAGAATGTGG CCCCGTAGAG
ACCAGTCCGA TGCAATATGA ACTGTCTTTA CAAATGGACG ACTGGCGCTA TCGCTCTGAA
GTTGATAAGA TCATTACTAC CCTGTTCAGC ACCGACCTGC TGTTTGGAGA ACCTGCCGCT
GATGATGACC TGGCCGATAT GAAATGGGTA AAAGTGGACG CAATCACCAC TATGATCACC
CAGGGTGAAA TCGTTAGCAC CCACATCCCA CTGTTAAAAA AATTAGCTGA AAAATATTCT
ACAAACGACT AA
 
Protein sequence
MTTLRPTGVI IARFQTPSLH EGHLQLIKEV KAKHNRLIIV LGVSPIKGGR KNPLDYYTRE 
RMIKKLFPEV IVLPLSDQPS DKGWSRKLDE MLSNNFNNET FILYGSRDSF IPFYSGRFPT
ADLPPVQDFN ATAQREAISD KVFDTEEFRA GIIYSTYNLY PKVYPTVDIA LFRNNRSELL
LGRKSAESGW RLPGGFTDPG DMSFDIAAKR ELLEECGPVE TSPMQYELSL QMDDWRYRSE
VDKIITTLFS TDLLFGEPAA DDDLADMKWV KVDAITTMIT QGEIVSTHIP LLKKLAEKYS
TND