| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0602 |
|---|
| Symbol | |
|---|
| ID | 8356713 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 735922 |
|---|
| End bp | 736608 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 644962753 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_003120301 |
|---|
| Protein GI | 256419648 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1051] ADP-ribose pyrophosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.430612 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGAACCTA AGCAAAACAT AAGACTCTGT GTGGACGCGG TGGTCTTCGG CTACACGGCC
AAAGAAAGTA TTTCCGTACT GCTCATCAAA CGCACCATTC CACCATTTAT GCACCGCTGG
GCACTGCCCG GAGGCTTCGT CATTGACGGG GAAACACTGG AAGAAGCAGT GACCCGTGAA
TTACTGACGG AAGCGGGTGT GCACATCAAC TACCTTGAAC AACTCTATAC ATTTGGTCAG
CCGGAAAGAG ACCCTCGTGG CAGAATCGTT TCTGTCGCCT ACTTCGGTCT TGTAAATCCG
ACCAACTTCA AACTGGCCGC CAGCTCTGAT GCAGAAGATG CGAACTGGTT CGATATTAAA
AAACTGCCCG ATCTTGCTTT TGACCACGCT ATCGTAGTCG ATGCCGCCAT ACAAAGGCTA
CGCGCCAAGA TCAGGTACGA ACCTATCGGC TTCGAACTCC TGGATAATAA ATTTCCCATC
TCTGACCTGG AAAAACTGTA CGAAACAGTA CTTGACAGGC CCATTGACCG CCGGAATTTC
CAGAAAAAGA TCAATCACCT GGGCATCCTG AAAGGTCATA ATGAGAAGCA GAAACACCCT
TCTGCCGGTA GACCCGCAAA GCTCTATAGC TTCAATGAAG AGCGTTATTT CCAACTGAAA
AAAGAAGGTA TCACATTCGA AATCTGA
|
|---|
| Protein sequence | MEPKQNIRLC VDAVVFGYTA KESISVLLIK RTIPPFMHRW ALPGGFVIDG ETLEEAVTRE
LLTEAGVHIN YLEQLYTFGQ PERDPRGRIV SVAYFGLVNP TNFKLAASSD AEDANWFDIK
KLPDLAFDHA IVVDAAIQRL RAKIRYEPIG FELLDNKFPI SDLEKLYETV LDRPIDRRNF
QKKINHLGIL KGHNEKQKHP SAGRPAKLYS FNEERYFQLK KEGITFEI
|
|---|
| |