Gene Cpin_0597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0597 
Symbol 
ID8356708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp731147 
End bp731875 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content47% 
IMG OID644962748 
Product2-phosphosulfolactate phosphatase 
Protein accessionYP_003120296 
Protein GI256419643 
COG category[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG2045] Phosphosulfolactate phosphohydrolase and related enzymes 
TIGRFAM ID[TIGR00298] 2-phosphosulfolactate phosphatase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.543467 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.916156 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAGAGC AGAAACCAGG ACTGGAAGTG TGTTTATCAC CGGCTTTATT GCATTTGTAC 
GATGTGAAGA ACAGTATTGT GGTGATTATT GACGTATTGA GAGCTACGTC TACAATTTGT
ACGGTATTGT ATAATGGCGC GAGCCGTGTA ATACCGGTAG CCACTGTACC GGAATGTGTC
AGCATTGGCG CACAGCTGGG AGAGAATGCC ATTACTGCCG GAGAAAGAGA CGGAAAGATT
GCGGAAGGTC TGCTGCACGG AAACTCCCCT TTTGAATACC CCAGAGAGTT TATACAGGAT
AAAACGCTGG TACTGACCAC TACAAATGGT ACCAAGCTGT TGCATATGGC AAAAGATGCC
ATAGCTATCA TCACTGGATC CTTTCCAAAC ATTTCTGCTG TTTGTGATTA CCTTGTTGCC
CAGGGCAAAC CAGTCATTCT TGGTTGCGCT GCCTGGAAAG ACCGCGTTAA TATGGAGGAT
ACTTTATTCG CCGGAGCGGT GGTAAACCGT ATCAAGGATC ATTTTACGGT GGATTGTGAT
TCTGCTGTCG CAGCAGAGGC ACTTTACATT ACTTCAAAAG ACAATATCCA CGAAGTAATG
AAGCAGGCAT CCCACTACAA ACGTCTCGCA AAATTTGGTC TGGAGAAGGA TATCCGGTAC
TGTCTGACCC CGGATGGCGC CAATGTGCTG CCTATTTACC GGAATGGAGA GCTTGTAGCT
GCGGAATAG
 
Protein sequence
MGEQKPGLEV CLSPALLHLY DVKNSIVVII DVLRATSTIC TVLYNGASRV IPVATVPECV 
SIGAQLGENA ITAGERDGKI AEGLLHGNSP FEYPREFIQD KTLVLTTTNG TKLLHMAKDA
IAIITGSFPN ISAVCDYLVA QGKPVILGCA AWKDRVNMED TLFAGAVVNR IKDHFTVDCD
SAVAAEALYI TSKDNIHEVM KQASHYKRLA KFGLEKDIRY CLTPDGANVL PIYRNGELVA
AE