| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0596 |
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| Symbol | |
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| ID | 8356707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 727209 |
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| End bp | 730961 |
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| Gene Length | 3753 bp |
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| Protein Length | 1250 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644962747 |
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| Product | SNF2-related protein |
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| Protein accession | YP_003120295 |
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| Protein GI | 256419642 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.160311 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCTGC CCCAGTTGCT TAAATACGTT TATAATAACG GAACCGATGA GGTGATCCGT
AGGGGGAAGC GCATCTTTGC GACTGGTGGT GTGGAATTGT TAGAAGCTGA TCCGGTTTTG
AAATCAGCCA CGTTCCGGGT AAAGAGCGAT ACCCATGCGA ATTATTATCG CGTTTCAATC
AGCAAATATC ACGAGACGAG CAATATGTCC GTCCGTTGTC AATGTCCTTA CAACCTGGGA
GACATCTGCA GGCATGAAGC CGCAGCCATG TTCCAGTTGC AGGAAATGCT GGACAAAAAT
CACTTCGAAA GCTACGATAC GCAATATAAC CAGCAACATA CGCTGGTAAA GATGAAGTTT
ATTGATCTGA AATCGCTTAA ACTGCTGACT TCCAACGAAA TATTTGCGGA AGCAGAGAAA
ATGGCCAAAC CGGCTAAAGC GTTTAAGATC GCATCCGCCA AGGATGAAAA GGTGGAAGCC
ACACTCAAAT ATGAAGGGCA GGAATATCCG ATGATCATAC AGCGGAATGA AGAACGCTTT
TTCGATACCG CCTGTAACTG TGATGAAACA GAGCATGCCA TCTGTAAACA CAAGACAGCC
CTGTTTCTCA ATCTTTTAAA TAATCACGGT CCATATTATT TCGATACCCT GCGTAACTGG
GACAAGGAAA AGAATAAACT GCTTGCCTTG TACGGGTACT CACTGGATGA TAACCTGGAA
GGAAAATTTA CTTTCACCTA CATGGAGGGG AAACCCTACC TGCGTGTACT GGATCCCGCC
ATCAAAAGAG TGGATGGTGT GGCGATCAGC AAACAGGCAG CTGCTGCGGC TCCTCCCCCT
CCAACGGAAG AAACGAATAC TATTACCCAG CGTATCGGGG TAGTTTTCAA TGCTAACGAA
CCACTATATC CGTTCTTCCG GATCGACCTG GTAAGTGGTG AAGTAAATGA TGAACAACGT
GAATTTGTAT CATTAGTCAA TAAACTGGAT CTGACCAAGT ATGTTGACTT CTATTTATAT
AAAGAATCTG ACCGTGACCT GATCACGCCT GTGCGTAAGG TACAGGGTAT GGAGGTTAGT
AAATTCCTTA GTAAGAACTC CCCTTTTGCG GGTATCTGGG AGAATATCAC ACATGACCAT
AACGAATCTG ACCTGCCAAC AGAAACCAAG GAACTGATGC TGGAATACCT GCATCCGAAA
CTGGCGAAGC TGTTTCCGCA GATGGCAGCG CACGGTTTGT TATTTCTCCT GCCTAACAGA
CAACAATTCA AGACCAAAAA TCTTCAGCAG ATACACCTGG CCGGTGACAG ATTACAGCCT
GTGTTTAAAA CACATACCCT GAATGATGCC ATCGAGGTGA CCTGTCATCT GGAGATCGAA
GGTGAACTGG TAAATGTGTC TGAAAATGAA TGGGATAGCT CTATCCTCTT CCTGAAGAAC
AAGGTGTTAT ACCTTTTCGA AAATCCACAG GATGCACTGC ATATCGAATT ATTCCGCGAA
AGCGGTAAAA TCCGTATCCC TGCCGATCAG TGGAGCACTT ATTTACAGGA TTATCTCTTA
CCGCTGAGCA AACAGTATCA GATACAGTTT GATAATTCGC TGCTGGCGGA AGTAGATGAT
ATATTACCGG AATGCAGGGT GTTCCTGCGT GAGGTAGGCG AGACATTTAT TATCCAACCA
GGATTTGCTT ACCATGGACA GGAAGTTGAA TGGAATGATG ACGGTAAGAT CACGGTACAG
GAGGGTAATA AGGTCCTGAT CATCCACAGA AACAAGGAAG CCGAACAGCA ATTCGTAGAA
AAGCTGAGCG GACTGCATAC CAACTTCTCA CAGCCCAATA CCAATAACTA TTTCTACCTG
AAGGCAAAAG AAGCGTTGAA GAACAACTGG TTCTTCCTTT TCTTCGATAC CCTGAAGGAA
ATGAATGTGC GTGTATTCGG TTTTGAGAAC CTGAAAAACT TTAAGTTCAG CGCTCATAAA
CCAGTTACCA ATCTGCAGAT CAGTTCCGGT ATTGACTGGT TTGATGCGCA GATCGAAGTG
ACTTATGGCG ATCAGAAAGT AAGTATCAGG GAAATCAAGC AGGCGCTGGC AGGTAAACAG
AACTATGTGC AACTGGCTGA CGGTTCACTT GGGCTGCTGC CGGAAGAGTG GCTGAAGAAA
TACTCCCTGT TATTCAAGAT CGGGGAAGAA AAAGACAAAG GTGCGCTGAA GCTGAGCAAG
TATAATTTCA GCGTGATCGA TGAACTGTAT GAGTTTATTG ACGATGAGGC GGTATTGATG
GAACTGGAAC AGAAGCGTCG TAAGCTGCTT CAGTTTGACG AGATCCGCAA TATATCGTTG
CCGCATAACC TCCATGCTAC TCTCCGTCCT TACCAGGAAA GTGGTTTCCA GTGGCTGAAC
TACCTTGATG AAGTGAAGTG GGGAGGTATC CTGGCCGATG ATATGGGTCT TGGTAAGACA
ATTCAGGCGC TGACATTCAT CCAGCATTAT AAGAATAAGC ACGATGATAA ATGTCTGGCG
CTGGTAGTAT GTCCTACGAC GCTGATCTAT AACTGGGAAA ATGAGATCCG CAAGTTTACG
CCGAGTATGA CGTATCATAT TCATCACGGT CCTACCCGTC TGAAAACAGC GGAAGAACTG
ATGAAGTTTG ATATCCTGAT CACTACATAT GGTACACTAC GTAGTGATGT ACAGACGCTG
ATGAAACTGG ATCTGGATTA TGTGGTACTG GATGAATCGC AGGCGATCAA AAACCCGCAG
AGTAAAGTAA CCAAAGCGGC GCAATTGCTG AATACCAGGA ACAAACTGGC ATTGAGTGGT
ACGCCGATGC AGAATAATAC ATTTGATATC TACGCGCAGA TGAACTTCCT GAACCCGGGT
ATGCTGGGTA GTGTGGACTT CTTCCGTAAT GAATTTGCTA CGCCGATAGA CAAATTCCAG
GATGAAGAAC GTAAGGACCA TTTGCGTAAG CTGATCTATC CGTTTATCCT GCGCCGTACG
AAAGAGCAGG TGGCAAAAGA ACTGCCTGAG AAGATCGAAA CTGTGATCTT CTGTGAAATG
GATGCGGAAC AGCGGCATAT CTATGACGCA TATCGTAACT CTTACCGCTC CAAGATCCTG
GGTGTTATTG AAGATCAGGG TATGGAACGT TCGCAGCTGA CGATCCTCCA GGGTCTGATG
AAACTGCGCC AGATCTGTGA CTCTCCGGCC ATCCTGAATG AGGCGGAACA GTATCCGAAC
CATTCTGTGA AGCTGCATGA GCTGACCCGT GAGATGAGTG AGAATATCAG TAACCATAAG
GTGTTGATCT TCTCCCAGTT CCTCGGTATG TTGGGGCTGA TCCGTGAGAA ACTGCAACAT
ATGAAGGTGC CGTTTGAGTA TTTTGATGGT AGTACTTCCG CTACTGAGCG TGAACGCGCG
ATTCAGAATT TCCAGACCAA TGATGACTGC AGGGTATTCC TGATCTCGCT GAAAGCGGGG
GGGGTGGGTC TGAACCTGAC GGCGGCGGAC TATGTATATA TCGTTGATCC ATGGTGGAAC
CCGGCAGTAG AGCAACAGGC GATTGACCGT ACCCACCGTA TTGGTCAGAC GAAAAACATC
TTCGCCTACA GGATGATCTG TAAAGATACA GTAGAGGAAA AGATCCTGCA ATTACAGGAG
CGTAAGAAAT CACTGGTTAA AGAGATCATT GCAGATGATT CCGGATTTGT GAAGAAACTG
ACGAAAGAGG ATGTATTGTA TCTCTTCAGT TAG
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| Protein sequence | MSLPQLLKYV YNNGTDEVIR RGKRIFATGG VELLEADPVL KSATFRVKSD THANYYRVSI
SKYHETSNMS VRCQCPYNLG DICRHEAAAM FQLQEMLDKN HFESYDTQYN QQHTLVKMKF
IDLKSLKLLT SNEIFAEAEK MAKPAKAFKI ASAKDEKVEA TLKYEGQEYP MIIQRNEERF
FDTACNCDET EHAICKHKTA LFLNLLNNHG PYYFDTLRNW DKEKNKLLAL YGYSLDDNLE
GKFTFTYMEG KPYLRVLDPA IKRVDGVAIS KQAAAAAPPP PTEETNTITQ RIGVVFNANE
PLYPFFRIDL VSGEVNDEQR EFVSLVNKLD LTKYVDFYLY KESDRDLITP VRKVQGMEVS
KFLSKNSPFA GIWENITHDH NESDLPTETK ELMLEYLHPK LAKLFPQMAA HGLLFLLPNR
QQFKTKNLQQ IHLAGDRLQP VFKTHTLNDA IEVTCHLEIE GELVNVSENE WDSSILFLKN
KVLYLFENPQ DALHIELFRE SGKIRIPADQ WSTYLQDYLL PLSKQYQIQF DNSLLAEVDD
ILPECRVFLR EVGETFIIQP GFAYHGQEVE WNDDGKITVQ EGNKVLIIHR NKEAEQQFVE
KLSGLHTNFS QPNTNNYFYL KAKEALKNNW FFLFFDTLKE MNVRVFGFEN LKNFKFSAHK
PVTNLQISSG IDWFDAQIEV TYGDQKVSIR EIKQALAGKQ NYVQLADGSL GLLPEEWLKK
YSLLFKIGEE KDKGALKLSK YNFSVIDELY EFIDDEAVLM ELEQKRRKLL QFDEIRNISL
PHNLHATLRP YQESGFQWLN YLDEVKWGGI LADDMGLGKT IQALTFIQHY KNKHDDKCLA
LVVCPTTLIY NWENEIRKFT PSMTYHIHHG PTRLKTAEEL MKFDILITTY GTLRSDVQTL
MKLDLDYVVL DESQAIKNPQ SKVTKAAQLL NTRNKLALSG TPMQNNTFDI YAQMNFLNPG
MLGSVDFFRN EFATPIDKFQ DEERKDHLRK LIYPFILRRT KEQVAKELPE KIETVIFCEM
DAEQRHIYDA YRNSYRSKIL GVIEDQGMER SQLTILQGLM KLRQICDSPA ILNEAEQYPN
HSVKLHELTR EMSENISNHK VLIFSQFLGM LGLIREKLQH MKVPFEYFDG STSATERERA
IQNFQTNDDC RVFLISLKAG GVGLNLTAAD YVYIVDPWWN PAVEQQAIDR THRIGQTKNI
FAYRMICKDT VEEKILQLQE RKKSLVKEII ADDSGFVKKL TKEDVLYLFS
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