Gene Cpin_0574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0574 
Symbol 
ID8356681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp701346 
End bp702422 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content41% 
IMG OID644962721 
Producthypothetical protein 
Protein accessionYP_003120273 
Protein GI256419620 
COG category[R] General function prediction only 
COG ID[COG3541] Predicted nucleotidyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTCG CGCAACTACA AACAGAAACA ACAGATCTGC TGTTGAAAGC TATCAGTGGC 
AGCAGGGCAC AACACTTACA CTCACCTACT TCAGATACGG ATATCAGAGG AATTTTTGTG
CTGCCTGCGA AAGAATTGTA TGGATTGAAT TATACCACAC AAGTGGCCAA TGAAACAAAT
GATGAAGTGT ATTATGAAGT GGGCCGGTTT ATAGACCTGC TCACTAAAAA CAACCCGAAT
ATTATTGAGT TGCTAAGTAC GCCGGATGAT TGTGTACTTT ATCGTCATCC CCTGATAGAG
AAGACCAAGC CTGAAGACTT TCTTTCAAAA CTATGTAAAG ATACTTTCGC TGGTTATGCG
GCTTCGCAGA TTAAGAAAGC CAAAGGCCTG AATAAAAAGA TACACAATCC GGTGGAGCCT
GCCCGTAAAT CTATTCTGGA CTTCTGTTAT ATCATTGCCG GTAATGGAAG TATTCCTTTG
AAGAAATGGT TAGACAACAA TGGATATACA CAGGAGGATT GTGGTCTTAC GCAGGTAGAT
CATTTCAGGG ATGTTTATCT GCTCTTTCAT CAGCATCAGA TAAATGATGG TTCTTATCTG
AAAGGAATTG CATCTGGTGA CACTGCCAAT GATGTGCAAC TCAGTTCTAT CCCTGTTGGC
GTGAAACACC TGGTTGTAAT GAACTTCAAT AAGGATGGTT ATTCCGTTTA TTGTCGTGAA
TACCTGGAAT ACTGGGAGTG GGTGGAAAAG AGAAATGACG CCCGCTATCA GAATACCATG
AGTCATGGTA AAAATTACGA TGCTAAGAAC ATGATGCACA CATTCCGTTT GCTTAGCATG
GCAGAAGAAA TTGCCACGGA ACATAAAGTG AATGTAAAAC GTAAGGACCG GGAATTTTTA
TTACAGATCA AGGCAGGCGC TTTTGAATAT GAAGATCTCC TGAAAATGGT GGATGAAAAA
ATGCAAAAGA TGGATGGCCT TTATGCCCGC TCAGGTTTAC CTGATGCTCC AGATCTGAAC
AAAGCAGAAG ATATATTGGT GAACATCAGA GCGTCATTTT ATAAACATAG TATATGA
 
Protein sequence
MTLAQLQTET TDLLLKAISG SRAQHLHSPT SDTDIRGIFV LPAKELYGLN YTTQVANETN 
DEVYYEVGRF IDLLTKNNPN IIELLSTPDD CVLYRHPLIE KTKPEDFLSK LCKDTFAGYA
ASQIKKAKGL NKKIHNPVEP ARKSILDFCY IIAGNGSIPL KKWLDNNGYT QEDCGLTQVD
HFRDVYLLFH QHQINDGSYL KGIASGDTAN DVQLSSIPVG VKHLVVMNFN KDGYSVYCRE
YLEYWEWVEK RNDARYQNTM SHGKNYDAKN MMHTFRLLSM AEEIATEHKV NVKRKDREFL
LQIKAGAFEY EDLLKMVDEK MQKMDGLYAR SGLPDAPDLN KAEDILVNIR ASFYKHSI