Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0573 |
Symbol | |
ID | 8356680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 700636 |
End bp | 701349 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644962720 |
Product | Phytanoyl-CoA dioxygenase |
Protein accession | YP_003120272 |
Protein GI | 256419619 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGCTG CATTCCATCA ACAAGAGATA GCCGATAAAG GGTTTACGGT CATCGGCAAT ATCTTCACAA CGGAAGAAGT AGGCGCGTTG GCCGCCTGTA TTCAGGAGGC AGATACTTCA AACGATACTT TTCGGAAAAC AAAAGATCTT TTTGCTATCC GGCAATTTCT AAAAGAAATA CCAGCGGTAA CAGCAGCGGT GTTTAATGAC AAGCTAAAGG ACGTGATCAG CCGTTTGTTT GGGGAAGGAT ATTGTCCGGT AAAGTCTATC TACTTTGATA AACCGGGTGA TTCTAACTGG TTTGTATCTT ATCACCAGGA CCTGACCATT TCCGTAAAAG AGAAAGCAGA AGTGCCTGGT TTCGGACCAT GGACGGTCAA GCAACAGCAA TATGCTGTAC AGCCTCCCCT AAATATATTG GAGCAGAATT TTACGATTCG CATACATCTT GATCATACAG ATGAACAAAA CGGTGCATTA AGAGTAGTGC CTGGTTCTCA TAGAAAGGGA ATTTACCGGC CGGAAACAAT TGACTGGACG GTGGAAACCG AAACCATCTG TGAGGTACCG GAAGGGGGTA TTATGATTAT GCGTCCTTTA TTGCTACATG CATCCAGCAG AACGACTAAC CATCACAGAC GCAGGGTGAT CCATATTGAG TTCAGTGATC AGTCTTTACC TGCGCCGCTT CAATGGTCTG AGTTATTACA ATGA
|
Protein sequence | MNAAFHQQEI ADKGFTVIGN IFTTEEVGAL AACIQEADTS NDTFRKTKDL FAIRQFLKEI PAVTAAVFND KLKDVISRLF GEGYCPVKSI YFDKPGDSNW FVSYHQDLTI SVKEKAEVPG FGPWTVKQQQ YAVQPPLNIL EQNFTIRIHL DHTDEQNGAL RVVPGSHRKG IYRPETIDWT VETETICEVP EGGIMIMRPL LLHASSRTTN HHRRRVIHIE FSDQSLPAPL QWSELLQ
|
| |