Gene Cpin_0573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0573 
Symbol 
ID8356680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp700636 
End bp701349 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content44% 
IMG OID644962720 
ProductPhytanoyl-CoA dioxygenase 
Protein accessionYP_003120272 
Protein GI256419619 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCTG CATTCCATCA ACAAGAGATA GCCGATAAAG GGTTTACGGT CATCGGCAAT 
ATCTTCACAA CGGAAGAAGT AGGCGCGTTG GCCGCCTGTA TTCAGGAGGC AGATACTTCA
AACGATACTT TTCGGAAAAC AAAAGATCTT TTTGCTATCC GGCAATTTCT AAAAGAAATA
CCAGCGGTAA CAGCAGCGGT GTTTAATGAC AAGCTAAAGG ACGTGATCAG CCGTTTGTTT
GGGGAAGGAT ATTGTCCGGT AAAGTCTATC TACTTTGATA AACCGGGTGA TTCTAACTGG
TTTGTATCTT ATCACCAGGA CCTGACCATT TCCGTAAAAG AGAAAGCAGA AGTGCCTGGT
TTCGGACCAT GGACGGTCAA GCAACAGCAA TATGCTGTAC AGCCTCCCCT AAATATATTG
GAGCAGAATT TTACGATTCG CATACATCTT GATCATACAG ATGAACAAAA CGGTGCATTA
AGAGTAGTGC CTGGTTCTCA TAGAAAGGGA ATTTACCGGC CGGAAACAAT TGACTGGACG
GTGGAAACCG AAACCATCTG TGAGGTACCG GAAGGGGGTA TTATGATTAT GCGTCCTTTA
TTGCTACATG CATCCAGCAG AACGACTAAC CATCACAGAC GCAGGGTGAT CCATATTGAG
TTCAGTGATC AGTCTTTACC TGCGCCGCTT CAATGGTCTG AGTTATTACA ATGA
 
Protein sequence
MNAAFHQQEI ADKGFTVIGN IFTTEEVGAL AACIQEADTS NDTFRKTKDL FAIRQFLKEI 
PAVTAAVFND KLKDVISRLF GEGYCPVKSI YFDKPGDSNW FVSYHQDLTI SVKEKAEVPG
FGPWTVKQQQ YAVQPPLNIL EQNFTIRIHL DHTDEQNGAL RVVPGSHRKG IYRPETIDWT
VETETICEVP EGGIMIMRPL LLHASSRTTN HHRRRVIHIE FSDQSLPAPL QWSELLQ