Gene Cpin_0563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0563 
Symbol 
ID8356669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp684687 
End bp685796 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content45% 
IMG OID644962709 
Producthypothetical protein 
Protein accessionYP_003120262 
Protein GI256419609 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCAAC TTATTCGTCA TGTGATTACA GGATTAGGAA TGGTATGCCT GTACCTTCCA 
TCCTATGCAC AACAGAAACC GGCCTATGTG CCACCCAGGC AGTATAATTC TTATCAAACC
TCTACTCCGA TCAAAATAGA CGGTGCAGGC AATGAAGACG CATGGTCCAA AGTCGTGTGG
AGTGACGACT TCACCGACAT CGAAGGAGAT AAACAACCTA CGCCTGCAAT GCGTACCCGC
CTGAAAATGT TGTGGGATCA GGAGAATCTG TATATACTGG CAGAACTGGA AGACCAGCAC
ATCTGGGCCA CCTTACATCA ACATGATACC ATCATCTTTC AGGATAATGA TTTTGAAGTA
TTTGTAGATC CTGATGGAGA TGGCGAAAAA TACTTCGAAA TTGAGATCAA TGCGCATAAC
ACTGTCATGG ATCTGTTCAT GAACAAACCT TACCGTGTTG GTGGCGATGC CCTGATGACC
TGGGATACCC GAGGTATACA GACCGCCGTG CAGATAGACG GTACATTGAA CAATCCTGCT
GATAAAGACA GGAAATGGAC GGTAGAAATG GCCATCCCTT TCAGTGCATT CGCGTTTTTC
AACGAAGGAC TTACCCCCAA GGACGGTGCG CGCTGGAGAA TCAATTTTTC CAGGGTAGAA
TGGGATACCG ATATCGTGAA AGGGCAATAC GTGAAACGGA AAGATCCTAA AACAGGCAAA
TCTTTACCTG AACATAACTG GGTATGGTCA CCACAGGGCA TCATCAATAT GCACGCACCT
GAGAAATGGG GATATCTGAA TTTCATCAGC AAACCAGCGG GTAGTGCACC TGTAACAATC
ACATTACCTG CTATCGAAGC AGCAAAAGAA TATCTCTGGG ATGTCTACGC AAGACAACAA
CAATACCGCA GAAAAAATGG CCGTTATGCT ACCAATCTGC AGGCTTTAGG CATCACTAAT
ACGAACATTA AAGAACAGGG CGTTTCCTAT ACATTAGCAC TGGAAGGTAT TACGAATCAA
TTCACCGCAA CACTGCTCGA CAAGAACACC AAACAACGTT GCGCTATTAA CCAGGAAGGT
AAAATTTCCC AAAACTCATC AAATGAATAA
 
Protein sequence
MSQLIRHVIT GLGMVCLYLP SYAQQKPAYV PPRQYNSYQT STPIKIDGAG NEDAWSKVVW 
SDDFTDIEGD KQPTPAMRTR LKMLWDQENL YILAELEDQH IWATLHQHDT IIFQDNDFEV
FVDPDGDGEK YFEIEINAHN TVMDLFMNKP YRVGGDALMT WDTRGIQTAV QIDGTLNNPA
DKDRKWTVEM AIPFSAFAFF NEGLTPKDGA RWRINFSRVE WDTDIVKGQY VKRKDPKTGK
SLPEHNWVWS PQGIINMHAP EKWGYLNFIS KPAGSAPVTI TLPAIEAAKE YLWDVYARQQ
QYRRKNGRYA TNLQALGITN TNIKEQGVSY TLALEGITNQ FTATLLDKNT KQRCAINQEG
KISQNSSNE