| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0559 |
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| Symbol | |
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| ID | 8356665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 680526 |
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| End bp | 681893 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644962705 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003120258 |
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| Protein GI | 256419605 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTTA ATAGCACATA CAGGCGTTTA TGGTCTCTGG CAGTTTGCGT AATACTGGCT
ATACCATATA CCAGTCAGGC GCAGGACAAG AAGAGCCTGT CTTTGAAAGA AGCCATAACG
CTTAGTATAC AGAACAGTAA AGAACTTAAA CTTAGCAAAA CAAGGATCGA CGCAGCACTT
GCATCTGTAA AAACAGCAAA CAATGCACAG TTACCGGATG TTAGTGTTTC TGGCTCATAT
CTCAGAATCA ACGAACCAAA TGTAGATCTG AAAATTAAAC TCGGAGGTGA CAGCACAAGT
TCAGGTGGAG GTTCTACTCC GAAAGTAAAC TCTCTGGCAT ACGCTATGGC TACCGTGTCA
GTTCCTATCT TCTCCGGATT TATCCTCCAG AGCCAGAAGG AATCCGCCCG TTACCTGGCT
GAAGCTGCAA AACTCGACGC AGATAAAGAC CGCGAAGCAG TTATCCAGAA CACGATCAAT
GCCTACAGCA ATCTGTATAA ATCACAGCAG GCAGTAGAAC TGGTACGTGA GAATCTGAAA
CAACAGCAGC AGCGTGTAAC TGATTTCGCC AATCTCGAAA AGAACGGCCT CGTAGCGCGC
AACGACTTAT TAAAAGTACA GTTACAGCAG TCAAATGTGG AAGTGTCCCT GGTAGAAGCT
GAAAGCAACC TGAAACTGGC TAATGTAGCG ATGGACCTGC TGTTAGGTCT GCCTGAAACA
ACAGAACTGG TAGCAGATAA CAATACTTTC GATCAGTCTG CCCCTGTTGC TTCAAAAGCA
GCCGCTGAAT GGGAACAGAT CGCATTACAG AACCGTAAGG ATGCCGCTTC ACTGTCCGCC
CGTGAAAAAG CTGCCACTGC AGGTATCAAA GCAGCTAAAG GTGAATATTA TCCTTCTGTT
GGTCTGACCG GTGGTTACGC TGCTATCTCA GTACCTAACG CACTGACGGT AACAAATGCA
CTCAACGTAG GTATCGGTGT TAAATACTCC CCTTCCGCTT TCTGGAAGTC AGGTTCAAAA
GTAACAGAAG CAAAAGTAAG ACTGCAGGAA GTACAGGTGA ATGAGGAACT GCTGGTGGAT
AACATCCACT TGTCTATCAA CAGAGCATAT CAGGAATACC TGGTAAACCA GAAGAAGATT
GAAGCTTATC AGAAAGCAAT CGACCAGGCG GGTGAGAATT ATAAGATAGT AAAGAATAAA
CAGGAGAACA ATCTCGCAAC AACTACCGAC CTGCTCGAAG CGGACGTAGC CAATGTTCAG
GCAAAACTGA ACTTCGCTTT CGCAAAAGCC GATGCAGTTG TAGCTTATAC CAAACTGCTG
GAAACCGCAG GTGTATTAAC AGAGACAGGA GCAGAAGCCG TTAAATAA
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| Protein sequence | MKLNSTYRRL WSLAVCVILA IPYTSQAQDK KSLSLKEAIT LSIQNSKELK LSKTRIDAAL
ASVKTANNAQ LPDVSVSGSY LRINEPNVDL KIKLGGDSTS SGGGSTPKVN SLAYAMATVS
VPIFSGFILQ SQKESARYLA EAAKLDADKD REAVIQNTIN AYSNLYKSQQ AVELVRENLK
QQQQRVTDFA NLEKNGLVAR NDLLKVQLQQ SNVEVSLVEA ESNLKLANVA MDLLLGLPET
TELVADNNTF DQSAPVASKA AAEWEQIALQ NRKDAASLSA REKAATAGIK AAKGEYYPSV
GLTGGYAAIS VPNALTVTNA LNVGIGVKYS PSAFWKSGSK VTEAKVRLQE VQVNEELLVD
NIHLSINRAY QEYLVNQKKI EAYQKAIDQA GENYKIVKNK QENNLATTTD LLEADVANVQ
AKLNFAFAKA DAVVAYTKLL ETAGVLTETG AEAVK
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