| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0557 |
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| Symbol | |
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| ID | 8356663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 677622 |
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| End bp | 679202 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644962703 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_003120256 |
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| Protein GI | 256419603 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.362761 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTACTAC AACAAGAATC ATTGGTAGAG TATGGCGCCC GCAGGGTGAT CATTACCATA
ACTGCCATAC TCTGTGCCTT GCTGGAGATC GTAGATACGA CCATCGTAAA CGTGGCATTG
AATGAAATGC GCGGTAACAT GGGAGCTACA CTGAGTGAGA TTGGCTGGGT AATCACAGCT
TATGCGATCG GTAACGTTAT CATCGTTCCG ATGACAAGCT GGTTATCCCA ACAGTTCGGA
CGTCGTAACT ACTTTGCAGT ATCAGTTGTA ATATTTACTA TATCTTCTTT CCTCTGTGGT
AATGCCACAA GTATGTGGGA ACTCGTATTG TTCCGCTTCA TACAGGGTCT TGGCGGTGGT
GCATTGCTGG TAACTTCCCA GACAATTATC ACCGAAAGTT ATCCTCCGGA AAAAAGAGGT
ATGGCGCAGG CGATTTACGG TTTAGGTGTG ATTATCGGAC CAACACTAGG TCCTCCTCTG
GGTGGTTATA TCGTTGACCA CTATACCTGG CCGTACATCT TTTACATCAA CATTCCTATC
GGTGTAGTAG CAACTCTGCT GACACTGCAA TTCGTAAGAA GTCCGAAATA CGGAGAAAAG
AAATCAGCGA ACGAAATTGA CTGGCTGGGT ATCGGATTCC TTGCACTGGC GGTTGGTTCC
CTTCAATATG TACTGGAACG CGGACAGGAA GATGACTGGT TTAATGATAC GACAATACTG
ATATTGGGAA TACTGGCAGT GATGGGCATC TTCTTCTTTA TATGGAGAGA GCTCGTATAT
AAGAATCCGA TCGTGAACGT AAGAGTGTTA TCAAATGGTA ACCTCAGAGT GGGCACACTC
CTCTCCTTCC TGATGGGCTT CGGATTGTAC GGATCCACCT TTATCATCCC GCTGTATACA
CAGAGTTTGC TGGGATGGAC CGCTACACAG TCGGGTATGC TGATGATACC AGCCGCACTC
ACCACGGCGT TTATGATGCC GATCATTGGT AAGATGCTGG AAAAAGGGAT ACCGCAACAG
TATCTGGTAG CAGCAGGTAT GTTCCTTTTC TTTGTCTTCT GTTTCTGGGG GTATAAAATC
ATTACGCCTG ACACCGGTTC AGAAGCCTTC TTCTGGATGC TGATCGTACG CGGTGTTGGT
ATGGGTATGT TGTTTATTCC GATCACAACA CTTTCCCTGT CTACATTGAA AGGTAAGGAA
ATTGGAGAAG GTGCGGCATT TACCGGTATG ATGAGACAGC TGGGTGGATC TTTTGGGGTG
GCATTGATTA CAACATTTGT ATCACGCCGG AATGAGTTAC ACAGAATGGA CCTTGTCAGC
AAATTGGATA CAAATAACCC GGATGTGATG AAGAGAGTGG CCGGAGCAAC CGCTAATTTT
GCTTCAAAAG GTATGGATAC AAGAAGGGCG CTGGGTAGCG CTTATCAGTC ACTGGAATAC
AGTGTCACCA AGCAGGCCAC CGTTATGTCT TACATGGATG TATTCCTCTA CCTCGGTGTA
CTGTTCCTGA TCTGTGTGCC TTTTGTGATG ATGGTGAAAG GAAAGAAAGC CGCAAAACTG
GATCCAAGTG CGATGCACTA A
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| Protein sequence | MLLQQESLVE YGARRVIITI TAILCALLEI VDTTIVNVAL NEMRGNMGAT LSEIGWVITA
YAIGNVIIVP MTSWLSQQFG RRNYFAVSVV IFTISSFLCG NATSMWELVL FRFIQGLGGG
ALLVTSQTII TESYPPEKRG MAQAIYGLGV IIGPTLGPPL GGYIVDHYTW PYIFYINIPI
GVVATLLTLQ FVRSPKYGEK KSANEIDWLG IGFLALAVGS LQYVLERGQE DDWFNDTTIL
ILGILAVMGI FFFIWRELVY KNPIVNVRVL SNGNLRVGTL LSFLMGFGLY GSTFIIPLYT
QSLLGWTATQ SGMLMIPAAL TTAFMMPIIG KMLEKGIPQQ YLVAAGMFLF FVFCFWGYKI
ITPDTGSEAF FWMLIVRGVG MGMLFIPITT LSLSTLKGKE IGEGAAFTGM MRQLGGSFGV
ALITTFVSRR NELHRMDLVS KLDTNNPDVM KRVAGATANF ASKGMDTRRA LGSAYQSLEY
SVTKQATVMS YMDVFLYLGV LFLICVPFVM MVKGKKAAKL DPSAMH
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