| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0554 |
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| Symbol | |
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| ID | 8356660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 674435 |
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| End bp | 676309 |
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| Gene Length | 1875 bp |
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| Protein Length | 624 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644962700 |
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| Product | potassium efflux system protein |
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| Protein accession | YP_003120253 |
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| Protein GI | 256419600 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0475] Kef-type K+ transport systems, membrane components |
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| TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00935447 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCACT CTTACTTTTT TATAACAATG ATTTATCTGG CGGCGGCGGT GATCTTCATT
CCCATTGCCA GAAAACTGGG CTTAGGTTCT GTATTGGGTT ATCTGCTGGC AGGTATCGTG
ATCGGGCCTT CGCTGTTAGG CTTCATCGGG CATGAAGGAC AGGATATTAT GCATTTCGCG
GAGTTTGGTG TGGTGATGAT GCTCTTCCTG ATAGGTATCG AACTGGAACC TGCCTTATTA
TGGAATATGC GGGCGCCGAT ACTGGGACTG GGTGGTTTGC AGGTATTGAT CACCACGGCG
ATTGTCACCG GTCTCGCGCT ATTACTCGGA CAACCTCTGA ATGCCTCACT TGCATTAGGT
ATGACCTTGT CCTTATCGTC CACAGCGATC GTGTTACAAA GTCTGAAAGA GAAGGGACAA
CTTTCTTCCG CCGCAGGACA AAGTGCGTTT TCCGTACTCT TATTCCAGGA TATCGCGGTG
ATCCCGATGC TGGCTATCTT CCCTTTACTG GCAGGCGCTG ACACCGGGAA TACGGCTGCC
CATGAGCAGA CCTTTCGGGA TAATCTGCCT GCCTGGGCAC AGACCCTGAT GGTATTAGGC
GCCGTAACAG TAATCGTCGT AGCAGGAAGA TACCTGGTAA GACCACTGCT AAGGGTAGTG
GCCAGGGCAC GTGTAAGAGA ACTGTTCACC GCTTTTGCCT TATTGCTGGT GGTGTCTATA
TCGGTATTAA TGAGTCTTGT CGGACTCAGT CCGGCATTAG GCGCCTTCCT GGGCGGTATT
GTATTAGCCA ACAGTGAATA CCGTCATGAA CTGGAAAGCG ATATAGAACC ATTCAAAGGA
TTGCTGCTAG GACTGTTTTT TATGGCCGTA GGCGCTTCTA TTGACTTCAG GCTGGTACTT
TCTATGCCCT GGGTCATACT CGGTCTTGTA GCAGCGCTAA TGCTGGTTAA AGCACTGACA
CTATTTATAC TGGGTAAGAC CTTCCGCATC AGTATCGAGC AGAATCTCTT ATTCGCGATG
GCACTCTCGC AGGTGGGAGA GTTTGCATTT GTCCTCTTAT CGTTTACACA ACAGAACAAT
ATACTTTCCC CGGAGACGGT CAGTATTATG ACCGCTGTCG TTGCTTTGAG CATGGCGCTT
ACACCGTTAC TGTTACTGCT GCATGAACGT ATTATCCAGC CACGATTCAA TAAAACCAAT
ACTGATGACA CACGTGAAGC GGATGAGATC CAGGAAAAGC ATCCGGTGAT CATTGCGGGC
TTTGGACGTT TCGGCAATAT AGTGGGTCGT TTCCTGCGCG TTAACGGCAT ACAGGCTACC
ATTCTTGACC TTGATTCAGA CAGGGTAGAT GCACTGCACA ACCTGGGTAT CAAAGTCTAT
TACGGCGATG CTTCCAGGCA TGACCTGCTT GCATCTGCCG GTGCGGCAGA TGCAAAGGTG
ATCATTATCG CGATGGACAC TGTTGAGCAG ACGCTGGAAG TAGTGAAAGT GGTACGAAAA
CATTTTCCGC ATCTCCAGAT GCTCGTTAAA GCAGAGAATA TCCCTGATAC CTATGAGCTG
ATGGACCTGG GGGTACTGCA TATCTATCGT GAAACGCTGG ACACGTCCCT CCGTATGGGA
GCGGATGCGT TACAGCTGCT GGGCGTAAGA GCCTATCAGG CGCAACGTAA CGTGAGTACA
TTCAGGAAGC AGGACGAAAA AGCACTGAAG GGGCTATCAG CTATCCGTAA TGATAAAAAG
CTGTACATCA ATACCGTAAA AGAAAGGATT GAAGAACTGG AAAAGCTGAT GTCCAATGAC
AGGGTTACCA GGTGGAACCC GGCTACGCAG GGATGGGATG AACAATCCCT TATTGACGAG
GCAAACCAGG ATTAA
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| Protein sequence | MEHSYFFITM IYLAAAVIFI PIARKLGLGS VLGYLLAGIV IGPSLLGFIG HEGQDIMHFA
EFGVVMMLFL IGIELEPALL WNMRAPILGL GGLQVLITTA IVTGLALLLG QPLNASLALG
MTLSLSSTAI VLQSLKEKGQ LSSAAGQSAF SVLLFQDIAV IPMLAIFPLL AGADTGNTAA
HEQTFRDNLP AWAQTLMVLG AVTVIVVAGR YLVRPLLRVV ARARVRELFT AFALLLVVSI
SVLMSLVGLS PALGAFLGGI VLANSEYRHE LESDIEPFKG LLLGLFFMAV GASIDFRLVL
SMPWVILGLV AALMLVKALT LFILGKTFRI SIEQNLLFAM ALSQVGEFAF VLLSFTQQNN
ILSPETVSIM TAVVALSMAL TPLLLLLHER IIQPRFNKTN TDDTREADEI QEKHPVIIAG
FGRFGNIVGR FLRVNGIQAT ILDLDSDRVD ALHNLGIKVY YGDASRHDLL ASAGAADAKV
IIIAMDTVEQ TLEVVKVVRK HFPHLQMLVK AENIPDTYEL MDLGVLHIYR ETLDTSLRMG
ADALQLLGVR AYQAQRNVST FRKQDEKALK GLSAIRNDKK LYINTVKERI EELEKLMSND
RVTRWNPATQ GWDEQSLIDE ANQD
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