Gene Cpin_0544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0544 
Symbol 
ID8356650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp647759 
End bp648685 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content49% 
IMG OID644962690 
ProductPfkB domain protein 
Protein accessionYP_003120243 
Protein GI256419590 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTAA CTGTTGTAGG TACGATGGCG TTCGATGATA TTGAGACGCC CTTTGGTAAA 
TCCGGACGAA TCATCGGTGG TTCAGCCACT TATATCGCAT GGGCCGCTTC TAATTTTGTG
AAGCCCATCA ATCAGGTATC TGTAATCGGA GGAGATTTTC CTCAGGATGA ATTGAACGCG
TTGACCGCCA AGGGTGTTGC GTTGGATGGT GTGCAGGTGA AAAAAGACGA AAAGTCCTTC
TACTGGGCGG GTAAATACCA TATGGATATG AACACCCGTG ATACACTGGC TACAGAGCTG
AACGTATTGG GTGAGTTTCA GCCGGTAATA CCTGACAGTT ACCAGGGCAG CGAATTCCTG
ATTCTGGGTA ACCTGACCCC ACAGGTACAG CTGAGCGTTA TCAAACAAAT GAAAACACGG
CCTAAACTGA TCGTAATGGA TACCATGAAC TTCTGGATGG AGGTTGCAAT GGACGATCTG
AAGAAGGTAC TGAAAGAAGT AGATGTGCTC CTGGTGAATG ATGGTGAAGC GCGTCAGCTG
ACAGGCGAAG TATCCCTGGT GAAAGCTGCC CGTACGATCC TGACCACTAT GGGACCAAAA
TACCTGATCA TTAAGAAAGG TGAGCATGGC GCCCTGCTGT TCCATGAAAA TCACGTATTC
TTCGCTCCTG CCCTGCCACT GGAAGAGGTA TTTGACCCAA CCGGTGCTGG CGATACTTTT
GCCGGCGGTT TTATTGGCCA CCTCGCGAAG ACGAAGGACA TCTCTTTTGA GAATATGAAA
ACTGCGATCA TCGTAGGTTC TGCAATGGCT TCCTTCTGTG TGGAGCGCTT CGGTGTAGGC
CGTCTGCGTG AAATCTCCCA GGACGATATC AATGCACGTC TCGATCAGTT CGTACAACTG
GTAAACTTCG ATATCGATCT GATCTAG
 
Protein sequence
MSLTVVGTMA FDDIETPFGK SGRIIGGSAT YIAWAASNFV KPINQVSVIG GDFPQDELNA 
LTAKGVALDG VQVKKDEKSF YWAGKYHMDM NTRDTLATEL NVLGEFQPVI PDSYQGSEFL
ILGNLTPQVQ LSVIKQMKTR PKLIVMDTMN FWMEVAMDDL KKVLKEVDVL LVNDGEARQL
TGEVSLVKAA RTILTTMGPK YLIIKKGEHG ALLFHENHVF FAPALPLEEV FDPTGAGDTF
AGGFIGHLAK TKDISFENMK TAIIVGSAMA SFCVERFGVG RLREISQDDI NARLDQFVQL
VNFDIDLI