Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0544 |
Symbol | |
ID | 8356650 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 647759 |
End bp | 648685 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644962690 |
Product | PfkB domain protein |
Protein accession | YP_003120243 |
Protein GI | 256419590 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCTAA CTGTTGTAGG TACGATGGCG TTCGATGATA TTGAGACGCC CTTTGGTAAA TCCGGACGAA TCATCGGTGG TTCAGCCACT TATATCGCAT GGGCCGCTTC TAATTTTGTG AAGCCCATCA ATCAGGTATC TGTAATCGGA GGAGATTTTC CTCAGGATGA ATTGAACGCG TTGACCGCCA AGGGTGTTGC GTTGGATGGT GTGCAGGTGA AAAAAGACGA AAAGTCCTTC TACTGGGCGG GTAAATACCA TATGGATATG AACACCCGTG ATACACTGGC TACAGAGCTG AACGTATTGG GTGAGTTTCA GCCGGTAATA CCTGACAGTT ACCAGGGCAG CGAATTCCTG ATTCTGGGTA ACCTGACCCC ACAGGTACAG CTGAGCGTTA TCAAACAAAT GAAAACACGG CCTAAACTGA TCGTAATGGA TACCATGAAC TTCTGGATGG AGGTTGCAAT GGACGATCTG AAGAAGGTAC TGAAAGAAGT AGATGTGCTC CTGGTGAATG ATGGTGAAGC GCGTCAGCTG ACAGGCGAAG TATCCCTGGT GAAAGCTGCC CGTACGATCC TGACCACTAT GGGACCAAAA TACCTGATCA TTAAGAAAGG TGAGCATGGC GCCCTGCTGT TCCATGAAAA TCACGTATTC TTCGCTCCTG CCCTGCCACT GGAAGAGGTA TTTGACCCAA CCGGTGCTGG CGATACTTTT GCCGGCGGTT TTATTGGCCA CCTCGCGAAG ACGAAGGACA TCTCTTTTGA GAATATGAAA ACTGCGATCA TCGTAGGTTC TGCAATGGCT TCCTTCTGTG TGGAGCGCTT CGGTGTAGGC CGTCTGCGTG AAATCTCCCA GGACGATATC AATGCACGTC TCGATCAGTT CGTACAACTG GTAAACTTCG ATATCGATCT GATCTAG
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Protein sequence | MSLTVVGTMA FDDIETPFGK SGRIIGGSAT YIAWAASNFV KPINQVSVIG GDFPQDELNA LTAKGVALDG VQVKKDEKSF YWAGKYHMDM NTRDTLATEL NVLGEFQPVI PDSYQGSEFL ILGNLTPQVQ LSVIKQMKTR PKLIVMDTMN FWMEVAMDDL KKVLKEVDVL LVNDGEARQL TGEVSLVKAA RTILTTMGPK YLIIKKGEHG ALLFHENHVF FAPALPLEEV FDPTGAGDTF AGGFIGHLAK TKDISFENMK TAIIVGSAMA SFCVERFGVG RLREISQDDI NARLDQFVQL VNFDIDLI
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