Gene Cpin_0543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0543 
Symbol 
ID8356649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp646887 
End bp647687 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content47% 
IMG OID644962689 
ProductS1/P1 nuclease 
Protein accessionYP_003120242 
Protein GI256419589 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAAAA AATTGTACCA TGTTTTACTG GGTGTCATAT TGCCATTGAT TCCCATGACA 
GGCTTTGCCT GGGGCGTTAC AGGCCATCGT GTTGTGGCAG AGATTGCCAG CCGTCATCTT
ACTCCGCAGG CACGCAAGGC AATTATAGCA CTGCTCGGTC CGCAAAGTAT GGCAATGGTC
GCCAACTGGC CTGATTTCAT CAAGTCAGAT ACCACCCATA AATATGATCA CACCTCTCCA
TGGCATTACC TGGATTTTCC TGCCAACGTT GATCGCGTGC ACTTTGATGA AGTACTGAAA
GAGCACACTA CAGGTGAAAA TCTGTATGCG CAGACCGAAG CGCTGATCAA AAAGCTGAAG
GATCCGGCTA CATCCAAAGC GGATAAGGTG TTTGCACTGA CTTTCCTCAT ACATATGATA
GGAGACATGC ACCAGCCTTT ACACATAGGC CGTGATGAAG ATCAGGGAGG CAATAAGATC
CCTGTAATGT GGTTTGACAA ACAAAGTAAC CTGCACCGTG TATGGGACGA GCAACTGATA
GAATTCCAGC AACTCAGCTA TACCGAATAT ACACAGGCGC TGGACACGGC ATCAGCCGCA
GAAGTGCGTA AATTACAAAG TGGTAGTATT GCCGACTGGA TGTACGATTC CAATCAGCTG
TCCAATAAAG TATATGCGCT GACACATGCC AACGACAAAC TGAGTTATCG TTATAACTAC
TGGTTTATCG CTGACCTGAA TGGCCAGCTG CTGAAAGGAG GCCTTCGTCT GGCGGCACTC
CTGAATCAGA TCTACAAATA A
 
Protein sequence
MFKKLYHVLL GVILPLIPMT GFAWGVTGHR VVAEIASRHL TPQARKAIIA LLGPQSMAMV 
ANWPDFIKSD TTHKYDHTSP WHYLDFPANV DRVHFDEVLK EHTTGENLYA QTEALIKKLK
DPATSKADKV FALTFLIHMI GDMHQPLHIG RDEDQGGNKI PVMWFDKQSN LHRVWDEQLI
EFQQLSYTEY TQALDTASAA EVRKLQSGSI ADWMYDSNQL SNKVYALTHA NDKLSYRYNY
WFIADLNGQL LKGGLRLAAL LNQIYK