Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0543 |
Symbol | |
ID | 8356649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 646887 |
End bp | 647687 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644962689 |
Product | S1/P1 nuclease |
Protein accession | YP_003120242 |
Protein GI | 256419589 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTAAAA AATTGTACCA TGTTTTACTG GGTGTCATAT TGCCATTGAT TCCCATGACA GGCTTTGCCT GGGGCGTTAC AGGCCATCGT GTTGTGGCAG AGATTGCCAG CCGTCATCTT ACTCCGCAGG CACGCAAGGC AATTATAGCA CTGCTCGGTC CGCAAAGTAT GGCAATGGTC GCCAACTGGC CTGATTTCAT CAAGTCAGAT ACCACCCATA AATATGATCA CACCTCTCCA TGGCATTACC TGGATTTTCC TGCCAACGTT GATCGCGTGC ACTTTGATGA AGTACTGAAA GAGCACACTA CAGGTGAAAA TCTGTATGCG CAGACCGAAG CGCTGATCAA AAAGCTGAAG GATCCGGCTA CATCCAAAGC GGATAAGGTG TTTGCACTGA CTTTCCTCAT ACATATGATA GGAGACATGC ACCAGCCTTT ACACATAGGC CGTGATGAAG ATCAGGGAGG CAATAAGATC CCTGTAATGT GGTTTGACAA ACAAAGTAAC CTGCACCGTG TATGGGACGA GCAACTGATA GAATTCCAGC AACTCAGCTA TACCGAATAT ACACAGGCGC TGGACACGGC ATCAGCCGCA GAAGTGCGTA AATTACAAAG TGGTAGTATT GCCGACTGGA TGTACGATTC CAATCAGCTG TCCAATAAAG TATATGCGCT GACACATGCC AACGACAAAC TGAGTTATCG TTATAACTAC TGGTTTATCG CTGACCTGAA TGGCCAGCTG CTGAAAGGAG GCCTTCGTCT GGCGGCACTC CTGAATCAGA TCTACAAATA A
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Protein sequence | MFKKLYHVLL GVILPLIPMT GFAWGVTGHR VVAEIASRHL TPQARKAIIA LLGPQSMAMV ANWPDFIKSD TTHKYDHTSP WHYLDFPANV DRVHFDEVLK EHTTGENLYA QTEALIKKLK DPATSKADKV FALTFLIHMI GDMHQPLHIG RDEDQGGNKI PVMWFDKQSN LHRVWDEQLI EFQQLSYTEY TQALDTASAA EVRKLQSGSI ADWMYDSNQL SNKVYALTHA NDKLSYRYNY WFIADLNGQL LKGGLRLAAL LNQIYK
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