| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0532 |
|---|
| Symbol | |
|---|
| ID | 8356638 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 632266 |
|---|
| End bp | 632898 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 644962678 |
|---|
| Product | electron transport protein SCO1/SenC |
|---|
| Protein accession | YP_003120231 |
|---|
| Protein GI | 256419578 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAAAA AGAATGTGTT CTATATTATA TTTTTTGCCC TGTTATCCAT CGCTTTCCTC
GGCTACTCAG GTTATGTGAT CAAAGGTGAG AAAGGCAGTT TCTTCGGGGA AGAGAAATTA
CCCATACTTG GCACCAACGG CCATATTATC GGCGGCTTCT CTTTTGTGAA CCAGGAAGGC
AAAACAATCA CCAGCAAAGA CGTTGAAGGG AAAGTATATG TAGCGGAATA TTTTTTTACT
ACCTGCACCA ACATCTGCCC CAAGATGAAT GCAAATATGA TGAAAGTCTA TGCCGCCTAT
AAAGATGAAC CCCGTTTCCG CATATTATCT CACACCGTAG ATCCGGAAAC CGACAGTATC
CCTGTATTGA AAAAATATGC AGAAGAACAC GGCGCAGATC CCAGTAACTG GTGGTTCCTC
ACCGGTAGCA AAAAAGAACT CTATAAACTG GCCAGAGCCG GTTATATGGT GGATAATGGA
ACATTCACCG GTGATGATGA CTTCGTGCAC ACCCAATGGT TCGCCCTGGT AGATGGCGAA
GCCCGTGTAA GAGGATTATA TGAAGGCACG AAAAAAAGTG ATGTAGACAA AATGATCGTT
GACATCAACC GGTTGCTAAA GGAAAAACAA TAA
|
|---|
| Protein sequence | MSKKNVFYII FFALLSIAFL GYSGYVIKGE KGSFFGEEKL PILGTNGHII GGFSFVNQEG
KTITSKDVEG KVYVAEYFFT TCTNICPKMN ANMMKVYAAY KDEPRFRILS HTVDPETDSI
PVLKKYAEEH GADPSNWWFL TGSKKELYKL ARAGYMVDNG TFTGDDDFVH TQWFALVDGE
ARVRGLYEGT KKSDVDKMIV DINRLLKEKQ
|
|---|
| |