Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0508 |
Symbol | |
ID | 8356614 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 607342 |
End bp | 607977 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644962654 |
Product | peptidase S16 lon domain protein |
Protein accession | YP_003120207 |
Protein GI | 256419554 |
COG category | [R] General function prediction only |
COG ID | [COG2802] Uncharacterized protein, similar to the N-terminal domain of Lon protease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAATT TTATTCCCAT ATTCCCACTT GGCATCGCAG TATACCCGGA TGAGCAGCTG AATCTGCACA TTTTTGAGCC AAGGTATAAA CAGCTTATAA AAGAATGTAT CGCTGAAAAC AAGCCTTTCG GTATTCCATC TGTGGTGGAC AGGCGCGTGG CGGAGTACGG AACACTGGTA GAGATCATCA GGATTGAAAA AACATATGAC AATGGTGAGC TGGATGTAGT AACGCGTGGT ATTAAAGTAT TCCGGATACT GGAAGTGATC AAAAGTATCC CCGATAAAAT GTTTGCAGGC GCCATTGTGA GTTATCCTGA TAACCAGTTC AGTAGCAATG CACGGTTACA TGCCCAGGTG GTACATGCGA TGAGAGAACT GCACAGTATT CTCCAGATCA ACAAGAATTT CCAGAAGGAA GACGAAGCTT TATCTTCTTA CGACATGGCA CATCATGTAG GACTTTCCCT GACAGAAGAA TATGAATTAC TGCATCTCTT CCAGGAATTA CAGCGATTGG AGTATCTGAA GCGTCATTTA CTGAAGGTGA TCCCCCTGAT GGCGGAAATG GAAAGATTGA AGGACAGGGT GAAGCTGAAC GGACATTTCA GGAATCTATC CACCGGGGAA GCGTAA
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Protein sequence | MTNFIPIFPL GIAVYPDEQL NLHIFEPRYK QLIKECIAEN KPFGIPSVVD RRVAEYGTLV EIIRIEKTYD NGELDVVTRG IKVFRILEVI KSIPDKMFAG AIVSYPDNQF SSNARLHAQV VHAMRELHSI LQINKNFQKE DEALSSYDMA HHVGLSLTEE YELLHLFQEL QRLEYLKRHL LKVIPLMAEM ERLKDRVKLN GHFRNLSTGE A
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