Gene Cpin_0508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0508 
Symbol 
ID8356614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp607342 
End bp607977 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content44% 
IMG OID644962654 
Productpeptidase S16 lon domain protein 
Protein accessionYP_003120207 
Protein GI256419554 
COG category[R] General function prediction only 
COG ID[COG2802] Uncharacterized protein, similar to the N-terminal domain of Lon protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAATT TTATTCCCAT ATTCCCACTT GGCATCGCAG TATACCCGGA TGAGCAGCTG 
AATCTGCACA TTTTTGAGCC AAGGTATAAA CAGCTTATAA AAGAATGTAT CGCTGAAAAC
AAGCCTTTCG GTATTCCATC TGTGGTGGAC AGGCGCGTGG CGGAGTACGG AACACTGGTA
GAGATCATCA GGATTGAAAA AACATATGAC AATGGTGAGC TGGATGTAGT AACGCGTGGT
ATTAAAGTAT TCCGGATACT GGAAGTGATC AAAAGTATCC CCGATAAAAT GTTTGCAGGC
GCCATTGTGA GTTATCCTGA TAACCAGTTC AGTAGCAATG CACGGTTACA TGCCCAGGTG
GTACATGCGA TGAGAGAACT GCACAGTATT CTCCAGATCA ACAAGAATTT CCAGAAGGAA
GACGAAGCTT TATCTTCTTA CGACATGGCA CATCATGTAG GACTTTCCCT GACAGAAGAA
TATGAATTAC TGCATCTCTT CCAGGAATTA CAGCGATTGG AGTATCTGAA GCGTCATTTA
CTGAAGGTGA TCCCCCTGAT GGCGGAAATG GAAAGATTGA AGGACAGGGT GAAGCTGAAC
GGACATTTCA GGAATCTATC CACCGGGGAA GCGTAA
 
Protein sequence
MTNFIPIFPL GIAVYPDEQL NLHIFEPRYK QLIKECIAEN KPFGIPSVVD RRVAEYGTLV 
EIIRIEKTYD NGELDVVTRG IKVFRILEVI KSIPDKMFAG AIVSYPDNQF SSNARLHAQV
VHAMRELHSI LQINKNFQKE DEALSSYDMA HHVGLSLTEE YELLHLFQEL QRLEYLKRHL
LKVIPLMAEM ERLKDRVKLN GHFRNLSTGE A