Gene Cpin_0500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0500 
Symbol 
ID8356606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp598152 
End bp599036 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content48% 
IMG OID644962646 
Productflavin reductase domain protein FMN-binding 
Protein accessionYP_003120199 
Protein GI256419546 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATCA TTCCAGGACA GCTGCCAACA GCAGCGCTAC AGGGATACCT GCAGGGTGCT 
GTTGCTCCCA GACCCATTTG CTTTGCCAGC ACCGTTGATA AAGAGGGGAG ACCTAACCTG
TCGCCCTTCA GCTTCTTTAA CATCTTTGGC AGCAACCCGG TTACACTGAT CTTTTCCCCT
GCCCGCAGGG TACGCGATAA TACGACTAAA CACACGCTGG AAAATATCCT GGAAACAATG
GAAGTGGTCA TCAATGTGGT GAACTATTCC ATGGTACAAC AGGCATCTCT TTCCAGCTGC
GAATACCCAA AGGGGACAAA CGAATTTGAG AAGTCCGGAT TTACTCCCAT AGCTGCTGAA
AAAGTAAAAC CTTTCCGCGT CAAAGAAAGT CCGGTTCAGT TTGAGTGTAA AGTGAAAGAA
GTACTGACAC AAGGTACAGA AGGCGGCGCA GGAAACCTGA TCATCTGCGA AGCGGTAATG
ATCCACATTA ACGACGAGAT CCTGAATGAA GCCGGTACTA TCGATCCGCA TAAGATTGAC
CTCGTAGCCC GTATGGGAGG GGATTACTAC TGTCGTGCAT CCGGCGCAGC AGTATTCGAA
GTAGCCAAAC CTAATACCTC ACTCGGTATC GGTATAGATG CATTGCCGCT GTCTGTCAGA
CAAAGCAGCA TCCTTACCGG TAACAACCTC GGACAACTCG CCAATGTACA CGTACAGCCG
GAAATAGATC CCGCATTTGA AGATGATCAT CTGAAGAACA TCTTTCAGTA CTACAGTATC
ACGCCTGATG AAATGGAAAA AGAACTCCAT CGTCATGCGC AGCAATTACT GGAAAAAGGA
CATGTACAGG AAGCCTGGCA GGTGTTACTC GCCGGTGCGC AATAA
 
Protein sequence
MQIIPGQLPT AALQGYLQGA VAPRPICFAS TVDKEGRPNL SPFSFFNIFG SNPVTLIFSP 
ARRVRDNTTK HTLENILETM EVVINVVNYS MVQQASLSSC EYPKGTNEFE KSGFTPIAAE
KVKPFRVKES PVQFECKVKE VLTQGTEGGA GNLIICEAVM IHINDEILNE AGTIDPHKID
LVARMGGDYY CRASGAAVFE VAKPNTSLGI GIDALPLSVR QSSILTGNNL GQLANVHVQP
EIDPAFEDDH LKNIFQYYSI TPDEMEKELH RHAQQLLEKG HVQEAWQVLL AGAQ