Gene Cpin_0499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0499 
Symbol 
ID8356605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp597135 
End bp598142 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content48% 
IMG OID644962645 
Productfumarylacetoacetate (FAA) hydrolase 
Protein accessionYP_003120198 
Protein GI256419545 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTTG TTAGTTATCT ACGGGATGAA GCTGACCACC TGGCCATTTT AATCGGCGAT 
AAATTGTACA ACACGCAGGA CCTGCACCCC AATCTGCCTG GTAACATGCA GATGTTTTTA
CTCTCCTGGG AAGAAGTAAT AGACCTGGCC CTCGAAATTG ATGCACAGCT GAAAGCCGGA
AAACACATAG GTTCCGCCAC CCCGATCCCT TACAATTCAG TGGAAATACT GGCGCCCGTT
CCCGCGCCTA CATCCTGCCG CGATGGTTAT GCGTTCAGAC AGCACGTAGC AGCTGCAAGA
CGTAACCGTC GTGTAGACAT GATCCCTGAA TTTGATCAGT ATCCGATCTT TTATTTCACC
AACCATAATG CGATACAAGG CCCCGGCGAT GTATTGTGTA TGCCTGACCA CTTCGATAAA
CTGGACTTCG AACTGGAAGC AGCAATTGTT ATCTGCAAAT TCGGTCGCAA CATACCGGCA
GCTGAAGCAG ACAACTATAT CGGTGGCTTT ATGATCATGA ACGACATGAG CGCCCGCACC
TTACAGATGG AAGAAATGAA GCTCAATCTG GGTCCGGCCA AAGGCAAGGA TTTCAGTACC
GTCATTGGCC CTATGCTGGT CACACCAGAC GAACTGGAAC ACCTCCTCAT TCCGGCAAAA
CCAGGCCATA CCGGCAAAAA CTATAACCTG AAAATGACCT GCCGTGTAAA TGGTGTGCAG
GTAAGTGAAG GTAACATGGG CGATATGGAC TGGACCTTTG CAGAAATTAT CGAACGTTGC
GCATATGGCG CTAATATCTA TCCGGGTGAT GTAATAGGCA GCGGTACCGT AGGCACCGGC
TGTTTCCTTG AACTGAACGG CACGGGTAAA CGTGAAAATC CTGATTACCA GGAACAATGG
TTACAACCAG GCGATGTAGT GGAAATGGAT ATCGACGGAC TGGGTACACT GACAAATACA
ATTGTGGCAG AAGAAACAGA CTTCTCTATT CTGCAATTGA AAAAATAA
 
Protein sequence
MKLVSYLRDE ADHLAILIGD KLYNTQDLHP NLPGNMQMFL LSWEEVIDLA LEIDAQLKAG 
KHIGSATPIP YNSVEILAPV PAPTSCRDGY AFRQHVAAAR RNRRVDMIPE FDQYPIFYFT
NHNAIQGPGD VLCMPDHFDK LDFELEAAIV ICKFGRNIPA AEADNYIGGF MIMNDMSART
LQMEEMKLNL GPAKGKDFST VIGPMLVTPD ELEHLLIPAK PGHTGKNYNL KMTCRVNGVQ
VSEGNMGDMD WTFAEIIERC AYGANIYPGD VIGSGTVGTG CFLELNGTGK RENPDYQEQW
LQPGDVVEMD IDGLGTLTNT IVAEETDFSI LQLKK