Gene Cpin_0468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0468 
Symbol 
ID8356574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp564312 
End bp565055 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content48% 
IMG OID644962614 
Productbiotin/acetyl-CoA-carboxylase ligase 
Protein accessionYP_003120167 
Protein GI256419514 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0340] Biotin-(acetyl-CoA carboxylase) ligase 
TIGRFAM ID[TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGGAC AGCCATTATA TATTTTAGAC ACAGTAGACA GCACCAATAA CTATGCCATG 
GAGCAGGTAA ATACCGGCCA TGTGACACCC GGTACAGCCT GGTTTGCCAT GGAGCAAACT
GCAGGAAAAG GACAACGTGG TAAACAATGG TCGTCTCCCC CGGGAGAAAA TCTCATGCTC
TCTATTGCCC TGCAACCGGG CACACTGCCT CTTTCCAGAC AATTCATGCT TAGCGTTGTA
ATATCACTCA GCACCTATGA CTGGTTCAGT AAATATGCCG GTGATGAAAC CGGAATTAAG
TGGAGTAATG ATCTTTACTG GCGTGACAGA AAGGCAGGTG GTATCCTGAT CGAAAACGTC
TTACGTGGCA CTACATGGCA ATATGCCATC GTGGGTATAG GGGTTAACCT GAACCAGACC
AGCTTCCCTC CGCATCTCAG CAATCCCGTA TCCCTCAAGC AGATCACAGG AAAAGACTGG
GATCCTATTG AGCTGACACG CACCCTTTGC GCCTGCCTGG AAGAGAGAAT GAAACTGTTG
CATCCTGCGC ATTACAACAC CCTTCTGGAC GAGTATAAAA GCAAACTTTT CCGGTTCAAT
AAAGCAGGTA CGTACCGCAT GAACGGGGAG TTATTTGAGG GCATTATCCG CGATGTACTT
CCTGATGGAA AACTCTGCCT TGAAAAGGAC GGAGAGATCC TGCAGCTGGG CTTTGGCGAA
GTAGAGTTCG TTATTGTAAA ATAG
 
Protein sequence
MIGQPLYILD TVDSTNNYAM EQVNTGHVTP GTAWFAMEQT AGKGQRGKQW SSPPGENLML 
SIALQPGTLP LSRQFMLSVV ISLSTYDWFS KYAGDETGIK WSNDLYWRDR KAGGILIENV
LRGTTWQYAI VGIGVNLNQT SFPPHLSNPV SLKQITGKDW DPIELTRTLC ACLEERMKLL
HPAHYNTLLD EYKSKLFRFN KAGTYRMNGE LFEGIIRDVL PDGKLCLEKD GEILQLGFGE
VEFVIVK