| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0466 |
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| Symbol | |
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| ID | 8356572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 561596 |
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| End bp | 563617 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644962612 |
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| Product | ATP-dependent metalloprotease FtsH |
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| Protein accession | YP_003120165 |
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| Protein GI | 256419512 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAGAG GCAACAACTT CAACAAGGGA GACAAAACGC CAAAGAAAGG ACCAAAGTTC
AACATATACT GGGTGTATGC TTTTATCGGG GTAGCTTTGC TGGCAATGAA CTTCGCTAAC
TTTGGCGCCG GACCCAAAGA GCTGAGTTTC CAGGAGTTCC AGCTCAATTA CCTGAAACCA
GGTGATGTAG ACAAGCTGGT AGTAGTGAAT AAAAAATCCG TAGAGGTCTA CATTAAGAAG
GACAGACTCC CTGAGTCTAA ATTCGACAAG GTATCCAAGA ACCGTCTTGG CTCTCCTAAT
CAAGGCCCTC ATTTCCGCTT CTCAATTGGT AGTGAAGAGA GTTTTAAGGC CGACCTTGAC
AAGGCACAGG CCGGAGTCCC TCTGGAAGAT CAGGTGAAAG TGACGTATGA GGACAGACAG
AGCTGGTTCG AACCATTTGT TCAACTGCTG CTCCCACTGG TGCTGCTGAT TGGATTGTGG
ATACTGCTGA TGCGTAAAAT GGGTGGCCCT GCCGGTGGTA GTGGTGGTCC AGGTGGCATC
TTCAACATTG GTAAATCCAA AGCGACACTG TTTGACAAGG GTACCCGTGT AAATATTACT
TTCAGTGATG TAGCCGGTCT GGATGAAGCG AAAGTGGAAG TGATGGAGAT CGTTGATTTC
CTGAAGAATC CGAAAAAATA TACCGCTCTG GGAGGTAAGA TTCCTAAGGG CGCATTACTG
GTAGGTCCTC CCGGTACAGG TAAGACCCTG CTGGCGAAAG CAATGGCAGG CGAAGCCCAG
GTACCTTTCT TCTCCATGTC AGGTTCTGAT TTCGTTGAAT TGTTCGTAGG TGTGGGTGCA
AGCCGTGTGC GTGACCTGTT CAAACAGGCT CGTGAGAAAG CGCCTTGTAT CATCTTCATT
GACGAGATCG ATGCGATCGG ACGTGCCAGA GGTAAGAATG TAATGATGAG TAATGACGAG
CGTGAAAATA CCCTGAACCA GCTGCTGGTA GAAATGGATG GTTTCGGTAC CGACAGCGGT
ATCATCATCC TGGCTGCTAC CAACCGTCCG GATGTACTGG ACAGCGCGCT GCTACGTCCG
GGACGTTTCG ACCGTCAGAT CTCTATCGAT AAACCAGACC TGAATGGCCG TGAGCACATC
TTCGACGTGC ATCTGAAACC AATCAAAACT TCTCCAAACC TCGATATTAA GAAACTGGCT
TCAATGACTC CTGGCTTTGC CGGTGCAGAC ATCGCCAACG TTTGTAACGA GGCTGCTCTG
ATCGCTGCCC GTAAAGGCAA GACTGAGGTT GAAATGGAAG ATTTCAATGA TGCAGTAGAC
AGGGTGATCG GTGGTCTGGA AAAGAAAAAC AAGATCATTT CTCCGGAAGA GAAAGAAGTG
ATCGCATACC ACGAAGCTGG TCACGCTATC TGTGGCTGGT ACCTTGAGCA CGCTAATCCG
CTGGTGAAAG TAACAATCGT TCCCCGTGGT GTAGCAGCAT TAGGTTATGC ACAATATCTG
CCGAAAGAAC AGTACCTCTA TAATACCGAA CAACTGCTGG ACGATATCTG TATGACTCTT
GGTGGTCGTG CAGTTGAAGA CATCGTTTTT GGTAAAGTAT CTACCGGCGC CCAGAATGAC
CTGCAGGTAA TTACCCGTAT GGCTTATGCA ATGGTAACCG TGTATGGTAT GAACGATAAG
GTTGGTAACG TGTCTTTCTA CGATCCTAAC AGCGATCAGT CATTCACTAA ACCTTACTCT
GAAGAAACAG CCAAAATGAT CGACGAAGAA GTTCGTCTCC TGATCGAAAA GGCTTATCAG
CGTACCAAAA CCCTGCTAAC CGATAAACTG GACAACGTGA AAGCGCTGGC GCAGGAACTG
CTGAAAAAAG AAGTATTGTA CCAGGCAGAT CTGGAAAGAT TGATCGGTAA ACGTCCTTGG
GATGTTCACC GTGAGCATAT CGCAAACAAG GAAGGTATGA CCACTGACGG CGTACATCCT
ACCGATATCA TCAATCCTTC ACCTACACCT GCTAACGCGT AA
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| Protein sequence | MERGNNFNKG DKTPKKGPKF NIYWVYAFIG VALLAMNFAN FGAGPKELSF QEFQLNYLKP
GDVDKLVVVN KKSVEVYIKK DRLPESKFDK VSKNRLGSPN QGPHFRFSIG SEESFKADLD
KAQAGVPLED QVKVTYEDRQ SWFEPFVQLL LPLVLLIGLW ILLMRKMGGP AGGSGGPGGI
FNIGKSKATL FDKGTRVNIT FSDVAGLDEA KVEVMEIVDF LKNPKKYTAL GGKIPKGALL
VGPPGTGKTL LAKAMAGEAQ VPFFSMSGSD FVELFVGVGA SRVRDLFKQA REKAPCIIFI
DEIDAIGRAR GKNVMMSNDE RENTLNQLLV EMDGFGTDSG IIILAATNRP DVLDSALLRP
GRFDRQISID KPDLNGREHI FDVHLKPIKT SPNLDIKKLA SMTPGFAGAD IANVCNEAAL
IAARKGKTEV EMEDFNDAVD RVIGGLEKKN KIISPEEKEV IAYHEAGHAI CGWYLEHANP
LVKVTIVPRG VAALGYAQYL PKEQYLYNTE QLLDDICMTL GGRAVEDIVF GKVSTGAQND
LQVITRMAYA MVTVYGMNDK VGNVSFYDPN SDQSFTKPYS EETAKMIDEE VRLLIEKAYQ
RTKTLLTDKL DNVKALAQEL LKKEVLYQAD LERLIGKRPW DVHREHIANK EGMTTDGVHP
TDIINPSPTP ANA
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