Gene Cpin_0465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0465 
Symbol 
ID8356571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp560954 
End bp561589 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content49% 
IMG OID644962611 
Productprotein of unknown function DUF162 
Protein accessionYP_003120164 
Protein GI256419511 
COG category[S] Function unknown 
COG ID[COG1556] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.988971 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATTT CTCCTGCGAA GGAAAACATC CTCAAGAGAG TACGAAACGC ATTGAGTCAG 
TCGGTGCAGT TGCCCTTCCC TAACTCGGAG GGCAACAGTT CCGTTTTTGT GAAGGAACAT
GATGGGCTGG AGATGAAATT CGCAGAAGAA TTTGCCCGCT TACAGGGGAA GTTCATTTTC
TGCACCAGTA AAAACGAACT GCTGGACAAC CTGGCGGCAT TAGTCGAATC CAAAGACTGG
AAAGACATAC ACTGCCAGAC GCCATCCCTG ATGGAGCAGT TTCAGTTAAA GCAGTTTCCT
TTTATGAATA AAGGAGATAT GCATACTGCG GAGGCAGCGA TCACAGACTG TGAGATGCTG
GTAGCGCGTA CAGGCACTAT GGTGCTGAGC GCCGCACAAG CTTCCGGAAG GGCCTTACCG
GTTTACACAC CGGTGCATAT AGTGATCGCT TACACACATC AGCTGGTATT CGATCTCAAA
GATGCAATCG CCCGTCTGAA AGAAAAGTAT CACGGTGATC TACCCTCCTC TATCTCCTTT
GCCTCCGGTC CCAGTCGTAC CGCAGACATC GAGAAAACAC TGGTAGTCGG AATACATGGC
CCGCGAGAGG TATATGTGTT CCTGTTGGAT GAATAG
 
Protein sequence
MKISPAKENI LKRVRNALSQ SVQLPFPNSE GNSSVFVKEH DGLEMKFAEE FARLQGKFIF 
CTSKNELLDN LAALVESKDW KDIHCQTPSL MEQFQLKQFP FMNKGDMHTA EAAITDCEML
VARTGTMVLS AAQASGRALP VYTPVHIVIA YTHQLVFDLK DAIARLKEKY HGDLPSSISF
ASGPSRTADI EKTLVVGIHG PREVYVFLLD E