Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0465 |
Symbol | |
ID | 8356571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 560954 |
End bp | 561589 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644962611 |
Product | protein of unknown function DUF162 |
Protein accession | YP_003120164 |
Protein GI | 256419511 |
COG category | [S] Function unknown |
COG ID | [COG1556] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.988971 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATTT CTCCTGCGAA GGAAAACATC CTCAAGAGAG TACGAAACGC ATTGAGTCAG TCGGTGCAGT TGCCCTTCCC TAACTCGGAG GGCAACAGTT CCGTTTTTGT GAAGGAACAT GATGGGCTGG AGATGAAATT CGCAGAAGAA TTTGCCCGCT TACAGGGGAA GTTCATTTTC TGCACCAGTA AAAACGAACT GCTGGACAAC CTGGCGGCAT TAGTCGAATC CAAAGACTGG AAAGACATAC ACTGCCAGAC GCCATCCCTG ATGGAGCAGT TTCAGTTAAA GCAGTTTCCT TTTATGAATA AAGGAGATAT GCATACTGCG GAGGCAGCGA TCACAGACTG TGAGATGCTG GTAGCGCGTA CAGGCACTAT GGTGCTGAGC GCCGCACAAG CTTCCGGAAG GGCCTTACCG GTTTACACAC CGGTGCATAT AGTGATCGCT TACACACATC AGCTGGTATT CGATCTCAAA GATGCAATCG CCCGTCTGAA AGAAAAGTAT CACGGTGATC TACCCTCCTC TATCTCCTTT GCCTCCGGTC CCAGTCGTAC CGCAGACATC GAGAAAACAC TGGTAGTCGG AATACATGGC CCGCGAGAGG TATATGTGTT CCTGTTGGAT GAATAG
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Protein sequence | MKISPAKENI LKRVRNALSQ SVQLPFPNSE GNSSVFVKEH DGLEMKFAEE FARLQGKFIF CTSKNELLDN LAALVESKDW KDIHCQTPSL MEQFQLKQFP FMNKGDMHTA EAAITDCEML VARTGTMVLS AAQASGRALP VYTPVHIVIA YTHQLVFDLK DAIARLKEKY HGDLPSSISF ASGPSRTADI EKTLVVGIHG PREVYVFLLD E
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