| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0460 |
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| Symbol | |
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| ID | 8356566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 553934 |
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| End bp | 556354 |
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| Gene Length | 2421 bp |
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| Protein Length | 806 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644962606 |
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| Product | putative exporter of the RND superfamily protein |
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| Protein accession | YP_003120159 |
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| Protein GI | 256419506 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGCAAC GCTTAGCAGG ATTCGTATTG AAATTTCGTT TACCACTCCT GGTCTTATTA
CTGTTGAGCA CTGCAGTGAT GACCTATTTC GCCAGCAAAG TAGAGCTTTC CTATGAAGCA
AATAAATCTA TCCCGCTGGA TAATGCGAAA TATAAGGAAT ATATGCAGTT CCGGGAATTG
TTCGGAGAGG ATGGTAATAT GATGGTAATC GGTATTCAGA CTGACAATTT CTTTCAGAAA
GATTTCTTTC ATGATTATGT AAAGCTGAAT GAGGACCTGA AAAAGGTGGA GTTTGTAGAG
AATGTACTGA GTGTACCTTT TGCCATTAAC CTGGTGAAAA ATGACAGTAC ACGCAAGCTG
ACAGCAGAAC CGCTTTTTCG CGGAGATCTG CAGCAGCAGG CCATACTGGA CAGCCTGGCT
GGTACATTGA ATAATCTGCC TTTTTATAAG GGATTATTGT ATAATCCGCA GACACATGCT
TACCTGATGA TGATCAACAT TCAGAAGGGT GTCATGATGA CTCCGCGCCG TACAGAGGTG
GTGGAGAATG TGATGAAGCT GGGTACTGCT TTCGGAGAGA AACATCATAC AGAAGTACGT
ATGAGTGGTT TACCGCTGAT CCGTACCCTG ATGGCAAATA AAGTGAAGAA AGAACTGGAT
CTGTTCCTGA AGCTGTCGTT TATACTGACG GCTGTGATCC TGCTGATCTT CTTCCGCTCT
ATCAGTGCGG TATTGATGTC CATGATCGTA GTAGCAATCG GCGTGATCTG GTCTGTAGCA
ACGATCGTGC TGCTGGGTTA TAAAATCACC TTGCTGACGG GGCTGATCCC ACCATTGATT
GTGGTGATCG GGATACCGAA CTGCGTGTAC TTCCTGAATA AGTATCATAC AGAATACGCG
AAGGACGGTA ACAAGACGCG GGCGCTGGTA CACATGATAC AACGTATGGG TATTGTGACG
CTGTTTACTA ACCTGACCGC AGCGATTGGT TTTGGTGTGT TCTGTTTTAC GAAGAGTGAA
TTGCTGAAAG AATTTGGTGT AGTAGCAGGT TTGAATATCA TGCTGATCTT CCTGATCTCT
TTTATTTTCC TGCCTGCAGT ACTGAGTTAC CTGCCACCGC CAAAGACCAA GCATACGAAT
TACATGAACA ACCGCACGTT CCGCGCTTTG CTGGACGGGC TGACTGCATT GGTATTCAAA
TATCGCGCAT GGGTGTATGG CGTGACGGTG GTGCTGGTGA TTGGAGCTGT AGCGGGTATG
CTGAAGTTGA AATCAGAGGC GCATATGTTG GATGATATTC CGACAAGTGA CAAGCTGTAT
ACAGATCTGA AATTCTTTGA GCAGAACTTC AAGGGTGTAA TGCCGCTGGA AATAGCGGTG
GATACAAAGA AGAAAAATGG TGTGGTAAAT CTGAAAACGC TGGAGAAACT GGATCAGTTA
TCTAAGCTGA TCGGTGCGCA GCCGGAGTTT GCAAGACCAT TGTCTGTAGC GGAAGGTATT
AAATTTGCCA AGCAGGCTTA TTATAATGGA GATAGTTCTA ACTACGCTAT TCCAAACCAG
TTTGATATTG GTTTCCTGGC GCCTTATCTG CGTATGAAGG GCGGCACTAA TGCGGCGGGT
AATGCGACTG CGTTTACGAA GCTGGTTTCC TCCTTTATGG ACAGCAGCCG TCAGGTAGCC
CGTGTGAGTG TGAATATGGC GGATGTTGGT TCTGCGAAAC TGCCGATATT GCTGGATTCA
TTGCGTCCGC AGGTAGATGC GATCTTTGAT ACGGCACAAT ACAAGGTAAG TTATACCGGT
ACGAGTGTGA TTTTCCTGGA AGGTAGCCGG TTTATTATCA ATGGTCTGAC AGAAAGTATT
CTGCTGGCGT TTGTACTGAT CATTTTCTGT ATGCTGTATC TGTTCCGTTC CTGGAGGATG
CTGCTGATAT CATTGATTCC TAACATCATT CCGCTGGCGG TAACAGCAGG CGTAATGGGC
TGGCTGAACA TTCCGTTGAA GCCATCGACG GTGCTGGTGT TTAGTGTGGC GCTGGGGATC
GCAATTGATG TGACGATCCG TTTCCTGGTC AACTTCAAGC AGGAGTTACC GCATCATAAC
CTGGATATTT CGGCTACGGT GAAGCAAACG ATCCATGAGA CGGGTTTGAG TATCATTTAT
ACATCACTGA TTCTGCTGGC TGGTTTTATG ATCTTTAGTT TCTCTGAATT CGGTGGAACG
AAGGCATTAG GTTGGTTGAC TTCACTGACT TTGTTAATGG CGATGATCAC AAACCTGACT
ATTTTGCCGG CATTGTTATT GTGGATGGAG AAGGCTTTAT TGAAGAAGGC TAAGAAGAAG
CAATTGTGGA ATGCGCTTGA TGAAGAGACG GATATAGAGA TGTCAGAGCT GGGGCTGAAA
GAAAGAGAAA AAGAAGACTA G
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| Protein sequence | MWQRLAGFVL KFRLPLLVLL LLSTAVMTYF ASKVELSYEA NKSIPLDNAK YKEYMQFREL
FGEDGNMMVI GIQTDNFFQK DFFHDYVKLN EDLKKVEFVE NVLSVPFAIN LVKNDSTRKL
TAEPLFRGDL QQQAILDSLA GTLNNLPFYK GLLYNPQTHA YLMMINIQKG VMMTPRRTEV
VENVMKLGTA FGEKHHTEVR MSGLPLIRTL MANKVKKELD LFLKLSFILT AVILLIFFRS
ISAVLMSMIV VAIGVIWSVA TIVLLGYKIT LLTGLIPPLI VVIGIPNCVY FLNKYHTEYA
KDGNKTRALV HMIQRMGIVT LFTNLTAAIG FGVFCFTKSE LLKEFGVVAG LNIMLIFLIS
FIFLPAVLSY LPPPKTKHTN YMNNRTFRAL LDGLTALVFK YRAWVYGVTV VLVIGAVAGM
LKLKSEAHML DDIPTSDKLY TDLKFFEQNF KGVMPLEIAV DTKKKNGVVN LKTLEKLDQL
SKLIGAQPEF ARPLSVAEGI KFAKQAYYNG DSSNYAIPNQ FDIGFLAPYL RMKGGTNAAG
NATAFTKLVS SFMDSSRQVA RVSVNMADVG SAKLPILLDS LRPQVDAIFD TAQYKVSYTG
TSVIFLEGSR FIINGLTESI LLAFVLIIFC MLYLFRSWRM LLISLIPNII PLAVTAGVMG
WLNIPLKPST VLVFSVALGI AIDVTIRFLV NFKQELPHHN LDISATVKQT IHETGLSIIY
TSLILLAGFM IFSFSEFGGT KALGWLTSLT LLMAMITNLT ILPALLLWME KALLKKAKKK
QLWNALDEET DIEMSELGLK EREKED
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