| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0458 |
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| Symbol | |
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| ID | 8356564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 549250 |
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| End bp | 552465 |
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| Gene Length | 3216 bp |
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| Protein Length | 1071 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644962604 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003120157 |
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| Protein GI | 256419504 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGAAAA GTTTATTTTT CCTCCTGCCC TCTATCGTGG TAGTTGGACA GGTGGTTGCG
CAGACCCGCC CCATTACAGG GAAGATCACT TCCTCTGATG ACGGGAGTCC GGTGATCGGC
GCTACAGTAA TTGTAAAAGG TACAACGACT GGTACTGTTA CAAACATGAA TGGTGAGTAT
ACCATTAATG TACCAGAAGG AGCTACTGCC CTAACTGTGA AATTCGTCGG TATGAAAGAC
CAGGAAATTA AACTTGGTAC AGGTGCGAAA CACAATGTAG TATTGTATCC CGACGTAACA
AAACTGACAG AAACTGTTGT AACTGCGAAC GCGATCCGTC GTGATAAAGC CTCCCTTGGT
TACTCAGCTC CAACCTTAAA AAATGACGAA CTGACCAAAG GTCAGAGCTC CAGCCCACTG
AATGCCCTTG CAGGTAAAGT AGCGGGTGTA AATATCTCCA CCAGTGCGAA CGCTCCAGGT
AGTTCTTCCA GGATCGTATT GAGAGGTGGT TCTTCTATCG GTGGTAATAA CCAGGCGCTG
ATGGTTGTGG ATGGTGTGCC TATCGACAAC AGCAGCATCA TTGGTGGTGG CGACAGCCGT
AGCACAGTTG ACTTCGGTAA CCGTGGTAAC GACCTGAACC CAGAAGACAT CGAATCTGTA
ACTGTTCTGA AAGGCCCTGC AGCAGCAGCG TTGTATGGTT CCCGCGCTTC TAACGGTGCG
TTGATCATCA CTACTAAGAG CGGTAAAAAA TCCGCAAACA AGAAGAACGA AGTAATTTTC
AACAGTTCAA TTACTTTGTC TAATGTGGTA AAACTGCCAG ATTTCCAGAA TGATTATGGT
CAGGGTTATG ATCAGGAGAT TATAGATCCT ATGGAAAACT GGAGCTGGGG TCCTAAGTTT
GATGGTACTG AGAAAGAGTG GGGACAATCT ATTAACGGTG TAAGACAGAA GAAAGCTTAT
TCTGCAGCTA AAGACAATGT TAAGAATTTC TTTAAAACTG GCCAGGCATA TAGCAATAAC
TTATCCCTCT CAGGTGCCGG TGAAAAAACT ACTTATTACT TATCTGTGAA TAGCCTGAAC
TCTGATGGAG TTATGCCAGG TTCTTCTGAC AAGTACAATA AATACAGCCT GCGTTTTAAT
GGTACCGCAC AGCTGAATAA CAAGTTCTAC ACAGGTATCA ACTTCAACTA CAGCAAGATT
AACGCTAACA TGATCCAGGG TGGTCAGGGT GAAGGTTCTG TATTTGATAA CGTACTGCAG
ACTCCACGTG ATATTCCTAT CGACAAACTG GGAGATCTGA GTAATCCTTA TAACAGCTTC
AATGTTCCAG ATGCGAATGG TATTCCTTCT TATGGTTATT ATGGCGCTTA TACCGTAAGC
CCTTACTACA TCCTGAAGAA CTATCGCAAC CTGAACGATG TTGACAGGGT AACAGGTAAC
TTCACTATCG GCTATAAACC AACTGAATGG TTGGATGTAC TCGAAAGATT AGGTACTGAC
GTATATACTG ACCGTCGTCG TTACAAATAT CCAAAATTCG ATCTGAAGCC ACTGGATGAC
AATCCTGACT ACTACGAAAC TGGTACTAAC AACCATACCA GCAATGGTAA ATATGGTGAG
GATAATTATA CACTGAGCGA AGTAACACAT GACCTGATGA TCACTGCAAA AAAGGATTTC
ACTCCTGATT TCAAAGCATC ATTGATGGTG GGTAATAACG TACGTCAGCG TATATTCAAC
ACGATGGAAA CTGAGACTAA CCAATCAAGT GGTCTGGTAA TTCCTGACTG GTATAACCTG
GATAACAGTA ACGGTCCTGT TTATACTTTC AACAGCCGCT CTACCCGTCG TTTGATCGGT
CTCTATGCAG ATCTGAACCT GTCATATAAA AACATGTTGT TCTTAGGTGC TACAGCGCGT
AACGACTGGT CTTCCACACT GCCAAAGGGT AATAACTCAT TCTTCTACCC TAGTGTGAAC
GCTTCCTTCG TGTTCACTGA GCTGACTAAA GAATCTGGTC TTGCAGAGAT CCTGAACTTT
GGTAAAGTAC GTGGTAGCTG GGCAAAAGTG GGTAACGATG CTGATCCATA CCTGCTGAGA
ACATACTATG GTAAAACTGA CCTGTCAAGT GGTTTCGGTA ACACTACCTT CCCATTTGGT
AACATTGCTG GTTATACCTA TGGTAACAGA ATCGGTAATC CGAACCTGAC GCCTGAGTTC
ACAACAGCAT TTGAAGTAGG TACTGAATTA GGTTTCCTGG AAAACAGAAT CTATGTAGAC
TTCTCTTACT ACCAGAATAA ATCTAAAGAT CAGATCCTGA ACGTACCTAT TCCAACTTCT
TCCGGTTTCA CCAGCCAGGT ATTTAATACT GGTCTTGTTG AAAACAAAGG TATTGAGGTT
AGCTTAAGAG GTACACCTAT CAAAACTGCT TCAGGTTTCA GCCTGGAACT GTTTGGTACT
TACACAAGAA ACAAGAATGA AGTAGTAGAT CTGGGTTCAG TTGACCAGGT GGTAATCGGT
GGTTTCGGTG GTATGAGTAT CGTTGCTGCG AAAGGAAGAC CATATGGTAC TTTCTATGCG
CAGGATATTC AGCGTGATGA GCAGGGACGT GTAATTGTAG ATGCATCAAG CGGTAATCCT
CTGCTAACAG CAAATCCGGT ATACCTGGGT TCTTATAATC CTAAATACCA GGCATCATGG
GGTGCAAATG CAAACTATAA AGGTTTCAGC TTCAGCATCC TGTTTGACAC TAAACAAGGT
AACCAGTTCT TCTCCCGTAC CAAGGACATC CTTGATTTTA CTGGAGCAGC TTACGAGACT
GCAGTGGGTG GTCGTGACGC CTCTGTTTGG GAAAACTCAG TATATACTGA TGCTACCACA
GGTAAACTGG TACCAAACAC AAGTGTTACT TATGACAAAC AAAACTGGTT CCCAAGTGTA
ATTCCTTCCG GCCAGCACGT TGTTGACGCA TCATATATCA GACTGCGTGA AGCTAGCTTG
TCTTACAGAC TGCCAAGAAA TCTGCTGAAC AGAACTCCAT TTGGTGATCT GTCTGTAGGT
ATCTTCGGTA ATAACCTGGC GCTGTGGACA GCTAAGGAGA ATAGATATGC AGATCCGGAA
GTTAACTCTG GTGGTGCAGG TAACGAGCAA GGTTTTGATT TCACTGCTCA ACCTTCACTG
AGAAACTACG GTTTTAATCT GAGAGTAACT TTCTAA
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| Protein sequence | MRKSLFFLLP SIVVVGQVVA QTRPITGKIT SSDDGSPVIG ATVIVKGTTT GTVTNMNGEY
TINVPEGATA LTVKFVGMKD QEIKLGTGAK HNVVLYPDVT KLTETVVTAN AIRRDKASLG
YSAPTLKNDE LTKGQSSSPL NALAGKVAGV NISTSANAPG SSSRIVLRGG SSIGGNNQAL
MVVDGVPIDN SSIIGGGDSR STVDFGNRGN DLNPEDIESV TVLKGPAAAA LYGSRASNGA
LIITTKSGKK SANKKNEVIF NSSITLSNVV KLPDFQNDYG QGYDQEIIDP MENWSWGPKF
DGTEKEWGQS INGVRQKKAY SAAKDNVKNF FKTGQAYSNN LSLSGAGEKT TYYLSVNSLN
SDGVMPGSSD KYNKYSLRFN GTAQLNNKFY TGINFNYSKI NANMIQGGQG EGSVFDNVLQ
TPRDIPIDKL GDLSNPYNSF NVPDANGIPS YGYYGAYTVS PYYILKNYRN LNDVDRVTGN
FTIGYKPTEW LDVLERLGTD VYTDRRRYKY PKFDLKPLDD NPDYYETGTN NHTSNGKYGE
DNYTLSEVTH DLMITAKKDF TPDFKASLMV GNNVRQRIFN TMETETNQSS GLVIPDWYNL
DNSNGPVYTF NSRSTRRLIG LYADLNLSYK NMLFLGATAR NDWSSTLPKG NNSFFYPSVN
ASFVFTELTK ESGLAEILNF GKVRGSWAKV GNDADPYLLR TYYGKTDLSS GFGNTTFPFG
NIAGYTYGNR IGNPNLTPEF TTAFEVGTEL GFLENRIYVD FSYYQNKSKD QILNVPIPTS
SGFTSQVFNT GLVENKGIEV SLRGTPIKTA SGFSLELFGT YTRNKNEVVD LGSVDQVVIG
GFGGMSIVAA KGRPYGTFYA QDIQRDEQGR VIVDASSGNP LLTANPVYLG SYNPKYQASW
GANANYKGFS FSILFDTKQG NQFFSRTKDI LDFTGAAYET AVGGRDASVW ENSVYTDATT
GKLVPNTSVT YDKQNWFPSV IPSGQHVVDA SYIRLREASL SYRLPRNLLN RTPFGDLSVG
IFGNNLALWT AKENRYADPE VNSGGAGNEQ GFDFTAQPSL RNYGFNLRVT F
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