| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0457 |
|---|
| Symbol | |
|---|
| ID | 8356563 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 547779 |
|---|
| End bp | 549227 |
|---|
| Gene Length | 1449 bp |
|---|
| Protein Length | 482 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644962603 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003120156 |
|---|
| Protein GI | 256419503 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAC ATATATTTAA GGCGACTGCA GGCGTATTAA CTGCGTTGTC TATCACCTTA
GCAGGATGTA GCGACTTCCT GGACGTTAAC GATAACCCGA ACCAGACTAC AGAAGCTTTA
CCTTCTCTGA TACTGCCTTC TGCGCAGGCG GCGGTTGGTA TTGTGCTCGG TAACACCTAT
CAGGTATATG GTAGCATGTG GAGCCAGTAC TGGACGCAGA ACAGAAGCTC TTCACAATAC
AAGAGCGTCG ATCAGTTCCT GTTACAGGGT TCAAATTTTG ACAGACCATG GCAATTATTA
TATGCAGATG GTATGGAAGA CCTGCAGCTG ATTATTAATC AGGCGAATGC TGAGCCGGTT
AAACAGTACG CTGCTGCTGC AATGATCTTA AAAGCATATG AGCTGCAGAT GCTGACAGAT
GCTTTCGGAG ATATTCCAAA TAGAGAAGCA TTACAGGGCG AACAACTGAA CCTGAATCCT
CACTACGATT CTCAGGAATC AGTATATGAT AGCATTTTTG CACTGATCAA CAGAGGTATC
TCTCTGATTG ATGCAAGTTC TGAATATATA CCTGGTGATG AAGACATGAT TTTCCAGGGA
GACATGGACA AATGGGAAGC TTTCGGTAAT ACCCTGAAGC TCCGTGCATA CCTCCGTCTG
TCTGAAGTAA ACCCAACTAA AGCACAGGCA GGTATTGCTA CGCTGGCTGG CGCTACATTC
CTGACAGAAG ACGCAGCAAT CAACTACACA TCAACTGGTG GTAATCAGAA CCCACTGTAT
GCTGAAATGG TTGGTCTGGG TCGTACCCAG AACCTGGTTG CCAGCGAAAC TGCTGTTAAT
CAAATGAAAG CGCTGAGCGA TCCACGCTTA CTAGCTTTCT ACCAGAATGC TGCCGGTACT
ACTACCGTTA ATCCTATTCC TCAGGGTAGC TTTAATACAC CTCCATCCGC AGCTTATCCG
CTGTCTCTGC CATCACCTAA CACAGGTGCT GCTCCAAGAA GTGCTGCTTC TGCACTGGCT
CCGGTTAAGT TCATGTCTGC TGCTGAAAGC TATTTCCTGC AGGCTGAAGC TGCTGCACGT
GGCTGGCTGG CTGGCGATGC AAGAGGCCTG TTTGAAGATG GTATCACTGC GAGCTTCGAA
GCTTACAATG TAACTCCAGG TGCTTATATC ACTACTGCTG TTGCTGCATT CCCTGCTAGC
GGACTGGCTG CTCAGCTGAA AGCGATCATC ACCCAGAAAT ACTTTGCTAT GAACGGTAAC
CAGGGCTTTG AAGCATGGTC TGAATGGCGT CGTACAGGTT ATCCTGACTT CTTCGTTCGT
TCAGTTGAGT CTTCTCTGCC TGCTGGTCAA TTCCCTGCAC GTTTCCTTTA TCCTAACACT
GAGCTGACCA GGAACCCTAA CTTCCCGGGT GCAAAAGTTG TTACCGATAA AGTTTGGTGG
GACAAGTAA
|
|---|
| Protein sequence | MKKHIFKATA GVLTALSITL AGCSDFLDVN DNPNQTTEAL PSLILPSAQA AVGIVLGNTY
QVYGSMWSQY WTQNRSSSQY KSVDQFLLQG SNFDRPWQLL YADGMEDLQL IINQANAEPV
KQYAAAAMIL KAYELQMLTD AFGDIPNREA LQGEQLNLNP HYDSQESVYD SIFALINRGI
SLIDASSEYI PGDEDMIFQG DMDKWEAFGN TLKLRAYLRL SEVNPTKAQA GIATLAGATF
LTEDAAINYT STGGNQNPLY AEMVGLGRTQ NLVASETAVN QMKALSDPRL LAFYQNAAGT
TTVNPIPQGS FNTPPSAAYP LSLPSPNTGA APRSAASALA PVKFMSAAES YFLQAEAAAR
GWLAGDARGL FEDGITASFE AYNVTPGAYI TTAVAAFPAS GLAAQLKAII TQKYFAMNGN
QGFEAWSEWR RTGYPDFFVR SVESSLPAGQ FPARFLYPNT ELTRNPNFPG AKVVTDKVWW
DK
|
|---|
| |