| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0453 |
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| Symbol | |
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| ID | 8356559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 538080 |
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| End bp | 539489 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644962599 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003120152 |
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| Protein GI | 256419499 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000455349 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAAT TATTTTTCCC GATATTAATG GCAGCGCTGC TTGTTATCAA CCAAGGCTGT
AATAAACAAC TGGACCTTTA TCCTGCAGAT AAATTGCCGA CTGCAGATGC ACTGAAAACA
ATACAAGGTG TTAATGCTGC TGTAAACGGT ATGTATGAAG GGCTGAAAGT AACTGAATAC
TATGGCAGGA ATTACCTGGT AATACCGGAA ATCGCTGCTG ATAACGTATA CCTTTCTTTC
AATAACAGTA ACCGTTTCCT TTCGAGCTGG CGTCTGAGCT GGGTGGTGGC TGACGGTGAT
GTAACAGGCG TCTGGAACAG GGTATATGCC GTGATCCTGC GTGCGAATAA TATCATCAAT
AGTGTACCAC TGCTGGAAGA CGGTACAACG GAAGAAAAGA ACAGCGCTCT TGGTCAGGCA
TTGTTTGTAA GAGCACTGGG GCATTTTGAC CTGCTGCGTG TGTTTTCTAC GCCTTATGCA
GTTGGTGGCG GCGGTACCCT GGGCGTACCA TTAATTACAA AATTTGAGGT CGGTTCACCG
AAAAGAAATA CCGTAGATGA AGTATACAAA CAGATCATCG CAGATCTGAC CACTGCTAAA
GATTTGCTGC CTAAAAGCAG GAATACGCCT TATAGCGCAA GTTCTTATGC AGCAACTGCA
TTACTCGCAA GAGTACATCT CTACAAAGGA GAAGATGCCG CTGCTATCAC TGCTGCTACA
GAAGTAATTA ATGCAGGTTA TAGTATTGCG CCTGCAAATA CTCTGGCAAA CTTTTATAAT
ACGCCGGGTA CTACTGAAGA TATCTTTACG ATCAGGATAC TCAGCAATGA GACTTTGGGA
TCTGATAACC TTGGTCGTAT TTATCTGAAG CCTGGTTATG GTGATGTCAG GGTGTCTCCG
GATCTGAAGA ATGTATTGGA GGCGAATGAT GCCAGAAATG TATTTGTTTC TGAATTCAGT
GGCAGCCCTG CTGAATTTCA GAATAATAAA TTCACCGGTC AGGATGGGAT ATCCGGTTTG
TACAGCATTA AAGTACTGCG TATTTCCGAG TTGTACCTGA TCCGAGCGGA AGCATATGCT
AAGACAGGCA GTTATGCCCT GGCACTGGCG GATGTAAATG AGATCCGTGC GCATCGTAAT
TTGCCGGCAC TTGAAAACGT GCCTGACGCC AATGTACTGA CAGCTGTGTT GAAAGAAAAA
CGTGTTGAGT TTATGTTTGA AGGGCATCGT TACTTTGACC TGCTGCGAAA TAAGCTGAGT
ATTGTACGTA CAACCTGTAA CAATCCTGCT CAGCTGAATA CGCCGAGATG TACAATTGAG
GCGTCCTCTC CTACCGCAAT ATTCCCGATA CCACAACGTG AGATTGATGT GAATCTGAAC
ATCGAACAGA ATCCGGGGTA TAAAAAATAA
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| Protein sequence | MKQLFFPILM AALLVINQGC NKQLDLYPAD KLPTADALKT IQGVNAAVNG MYEGLKVTEY
YGRNYLVIPE IAADNVYLSF NNSNRFLSSW RLSWVVADGD VTGVWNRVYA VILRANNIIN
SVPLLEDGTT EEKNSALGQA LFVRALGHFD LLRVFSTPYA VGGGGTLGVP LITKFEVGSP
KRNTVDEVYK QIIADLTTAK DLLPKSRNTP YSASSYAATA LLARVHLYKG EDAAAITAAT
EVINAGYSIA PANTLANFYN TPGTTEDIFT IRILSNETLG SDNLGRIYLK PGYGDVRVSP
DLKNVLEAND ARNVFVSEFS GSPAEFQNNK FTGQDGISGL YSIKVLRISE LYLIRAEAYA
KTGSYALALA DVNEIRAHRN LPALENVPDA NVLTAVLKEK RVEFMFEGHR YFDLLRNKLS
IVRTTCNNPA QLNTPRCTIE ASSPTAIFPI PQREIDVNLN IEQNPGYKK
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