| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0451 |
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| Symbol | gatB |
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| ID | 8356557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 535389 |
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| End bp | 536843 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644962597 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
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| Protein accession | YP_003120150 |
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| Protein GI | 256419497 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
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| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.716657 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCAG CCATCGATTC AGACAAATAC GAAGTAGTCA TCGGCCTTGA AGTACATGCC
CAGCTACTGA CAGAAAGTAA ATTATTTTGT GGAGACAGTG CAGCTTTCGG AGGCGCTCCC
AATACCCATA TCAGCCCGAT CACACTGGGC CATCCGGGTA CTCTTCCAAA ACTGAACCGT
AAAGCGGTGG AATATGCCAT CCGCCTCGGT CTGGCCTGCG GTAGCAGGAT TGAGCGGGAA
AATTACTTTG CCCGTAAAAA CTATTTCTAT CCGGACCTTC CGAAAGGCTA CCAGATATCT
CAGCATACGG CGCCTATCTG TGATGGCGGT ATCGTTGCTA TTCCCGTGGC CGGTGGTCAA
CGGGATATTC AGCTGAACCG TATTCACCTG GAAGAAGATG CCGGTAAGTC GATGCACGAC
CAGGATCCTT CATTCACTAT GGTGGATTAC AACCGTGCCG GGGTACCATT GGTAGAGATC
GTGACCGAAC CAGCGCTGCA CAGCAGTGAT GAAGTATATT CCTTCCTGAC AACCCTCCGC
AGACTGGTAC GCTGGCTGGA CGTTTGTGAC GGTAACATGG AAGAAGGCAG TATGCGTTGC
GACGCCAACA TTTCCATCCG TCTGAAAGGA GAGACTAAAC TGGGCACAAA AGTCGAAGTA
AAAAACCTGA ACTCTATCCG TAACGTAAAA CGTGCGGTAG AGGGCGAAAT AAAACGCCAG
ATCTCCATCG TGGAAGAAGG TGGCACCATC CTCCAGGAAA CCAGGAGTTT TGACGCCGGT
AATGGTACCT CTTTCTCCCT GCGTTCCAAA GAAGAAGCGA ATGACTATCG CTACTTCCCT
GAACCAGACC TGGCGCCTTT CCACCTGACT GAAGATTATC TCGATCAGTT GTTAAAAGCA
TTACCGGAGC TGCCGGAAGC AATGGTAGAG CGTTATGTCA GCCAGTACGG ACTACCTGAT
TACGACGCAC GTGTACTGTG TGATGATAAA GCAACTGCTG ACTATTATGA GCAGGTAGTT
GCTGTTATTC CCAAACATAA AGCAGTAGCC AACTGGCTCT TAGGTCCGGT AAAATCCACC
CTGAACGAGC AAGGCGCTGC CATTAGTGAT TTCGCACTGT CACCTGCTGC ACTGGCAGGT
CTGATACAAC TGGTAGAAGA TGGTAAAGTG AGCTTTTCCA TAGCTTCTTC CCGTATCTTC
CCTGAATTGC TGCTAAATAC TACAGAAAAG CCGCTGGATA TTGCAACAAG ACTGAACCTC
CTGCAGGATA ACAATGCCGG CAGCATTGCG CCGATCATTG ACGAAGTCCT GGCAAAATAT
CCGGATAAGG TAGCAGAATT CCGTAAGGGT AAAAAAGGGC TGATGGCACT CTTTGTCGGA
GAAGTAATGA AACTCTCCAA AGGCAAGGCA GATCCTAAAC TGACCAACCA ATTACTTGCT
GAAAAACTGA AATAA
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| Protein sequence | MSAAIDSDKY EVVIGLEVHA QLLTESKLFC GDSAAFGGAP NTHISPITLG HPGTLPKLNR
KAVEYAIRLG LACGSRIERE NYFARKNYFY PDLPKGYQIS QHTAPICDGG IVAIPVAGGQ
RDIQLNRIHL EEDAGKSMHD QDPSFTMVDY NRAGVPLVEI VTEPALHSSD EVYSFLTTLR
RLVRWLDVCD GNMEEGSMRC DANISIRLKG ETKLGTKVEV KNLNSIRNVK RAVEGEIKRQ
ISIVEEGGTI LQETRSFDAG NGTSFSLRSK EEANDYRYFP EPDLAPFHLT EDYLDQLLKA
LPELPEAMVE RYVSQYGLPD YDARVLCDDK ATADYYEQVV AVIPKHKAVA NWLLGPVKST
LNEQGAAISD FALSPAALAG LIQLVEDGKV SFSIASSRIF PELLLNTTEK PLDIATRLNL
LQDNNAGSIA PIIDEVLAKY PDKVAEFRKG KKGLMALFVG EVMKLSKGKA DPKLTNQLLA
EKLK
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