Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0445 |
Symbol | |
ID | 8356551 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 527998 |
End bp | 528969 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644962591 |
Product | Peptidase M23 |
Protein accession | YP_003120144 |
Protein GI | 256419491 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAGG TTAAATACTT TTATAATACA CAAACGCTCA AATATGAAAA ACTCGTAGTG TCCCTGCGGG TGAAACTGTT GAGGATACTG GGATTTGTTT CTGCTGCCAT TGTAACGGGA TTCATCTTCC TGTCCGTATC CTACCGTGTA CTGGATTCTC CAAAAGAGAA ACGGTTACGC CGTGAGCTGG AGGTAATGAA TGAAAAGTAT GAGGCCATGG AAGACCGTAT GAACGAGGTG AAATCCCAGC TGGGAGAACT GGAACATCGT GATAACGAGA TCTACCGGGT TATTTTTGAG GCATCTCCTA TCCCGGATAG TACTCGTGCC GGCAGTGCAG AGAAAGAAGA AGAGCTGATC CAGTTACAGT CTTTCTCCAG CAGCGAGATT ATCGCCAGCA CAGGCGCTTT GCTCCAGGAA CTGTTACACC GTATCTCCAT CCAGGCTAAA TCTTACGAAA AGATCGATGA CCTGGTGAAA AATAAACAGA AAATGCTGGC CTCTATCCCT GCTATTCAGC CGGTGGCCAA CAAAGACCTG AAACGTATTG CTTCCGGGTT CGGTTATCGT ATTGACCCTA TTTACAAAAC AGTAAAGTAT CACTCCGGAC TTGACTTCGC CGCTCCGGCA GGTACGCCTA TCTATGCGAC GGGCGACGGG GTGGTAGAAG ACGCCAGCCT CAGCGACGTG GGTTATGGTA ACCACGTTAC AATCAATCAC GGCTATGGTT ATAAGACACT GTACGGGCAC ATGCTGAAAA TGAAAGTGAG TACAGGTATG ACCGTAAAAC GTGGTGATGT GGTAGGCTGG GTAGGTAGTA CAGGTAAATC GACAGGACCG CACTGCCACT ACGAGGTAGT GAAAAATGGA GAGAAAGTTG ACCCGGTATA CTTCTTCTTT AATGATCTGT CTCCCGAAGA GTTTGACCGT ATGCTGAAGA TTGCCCGATC AGGCAACCAG TCATTCGACT AA
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Protein sequence | MKKVKYFYNT QTLKYEKLVV SLRVKLLRIL GFVSAAIVTG FIFLSVSYRV LDSPKEKRLR RELEVMNEKY EAMEDRMNEV KSQLGELEHR DNEIYRVIFE ASPIPDSTRA GSAEKEEELI QLQSFSSSEI IASTGALLQE LLHRISIQAK SYEKIDDLVK NKQKMLASIP AIQPVANKDL KRIASGFGYR IDPIYKTVKY HSGLDFAAPA GTPIYATGDG VVEDASLSDV GYGNHVTINH GYGYKTLYGH MLKMKVSTGM TVKRGDVVGW VGSTGKSTGP HCHYEVVKNG EKVDPVYFFF NDLSPEEFDR MLKIARSGNQ SFD
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