Gene Cpin_0445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0445 
Symbol 
ID8356551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp527998 
End bp528969 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content47% 
IMG OID644962591 
ProductPeptidase M23 
Protein accessionYP_003120144 
Protein GI256419491 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGG TTAAATACTT TTATAATACA CAAACGCTCA AATATGAAAA ACTCGTAGTG 
TCCCTGCGGG TGAAACTGTT GAGGATACTG GGATTTGTTT CTGCTGCCAT TGTAACGGGA
TTCATCTTCC TGTCCGTATC CTACCGTGTA CTGGATTCTC CAAAAGAGAA ACGGTTACGC
CGTGAGCTGG AGGTAATGAA TGAAAAGTAT GAGGCCATGG AAGACCGTAT GAACGAGGTG
AAATCCCAGC TGGGAGAACT GGAACATCGT GATAACGAGA TCTACCGGGT TATTTTTGAG
GCATCTCCTA TCCCGGATAG TACTCGTGCC GGCAGTGCAG AGAAAGAAGA AGAGCTGATC
CAGTTACAGT CTTTCTCCAG CAGCGAGATT ATCGCCAGCA CAGGCGCTTT GCTCCAGGAA
CTGTTACACC GTATCTCCAT CCAGGCTAAA TCTTACGAAA AGATCGATGA CCTGGTGAAA
AATAAACAGA AAATGCTGGC CTCTATCCCT GCTATTCAGC CGGTGGCCAA CAAAGACCTG
AAACGTATTG CTTCCGGGTT CGGTTATCGT ATTGACCCTA TTTACAAAAC AGTAAAGTAT
CACTCCGGAC TTGACTTCGC CGCTCCGGCA GGTACGCCTA TCTATGCGAC GGGCGACGGG
GTGGTAGAAG ACGCCAGCCT CAGCGACGTG GGTTATGGTA ACCACGTTAC AATCAATCAC
GGCTATGGTT ATAAGACACT GTACGGGCAC ATGCTGAAAA TGAAAGTGAG TACAGGTATG
ACCGTAAAAC GTGGTGATGT GGTAGGCTGG GTAGGTAGTA CAGGTAAATC GACAGGACCG
CACTGCCACT ACGAGGTAGT GAAAAATGGA GAGAAAGTTG ACCCGGTATA CTTCTTCTTT
AATGATCTGT CTCCCGAAGA GTTTGACCGT ATGCTGAAGA TTGCCCGATC AGGCAACCAG
TCATTCGACT AA
 
Protein sequence
MKKVKYFYNT QTLKYEKLVV SLRVKLLRIL GFVSAAIVTG FIFLSVSYRV LDSPKEKRLR 
RELEVMNEKY EAMEDRMNEV KSQLGELEHR DNEIYRVIFE ASPIPDSTRA GSAEKEEELI
QLQSFSSSEI IASTGALLQE LLHRISIQAK SYEKIDDLVK NKQKMLASIP AIQPVANKDL
KRIASGFGYR IDPIYKTVKY HSGLDFAAPA GTPIYATGDG VVEDASLSDV GYGNHVTINH
GYGYKTLYGH MLKMKVSTGM TVKRGDVVGW VGSTGKSTGP HCHYEVVKNG EKVDPVYFFF
NDLSPEEFDR MLKIARSGNQ SFD