Gene Cpin_0444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0444 
Symbol 
ID8356550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp527320 
End bp527946 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content46% 
IMG OID644962590 
Producttranscriptional regulator, MerR family 
Protein accessionYP_003120143 
Protein GI256419490 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACAAC TGGACCTTTT TTCTTCACCA GATCCAAAGC CGCAAGTGCA AGTGCCAGAA 
CAGGTACAGG AACCCGTCGT TGTCATAAAG CCGGCCCCCG CGCCGCCACC ACCACCAAGG
CCGCAGCCGG AGGTGGAAAT TCCCGTGAAG ATACAGGTAC AGATGCCATC AGACAATTTG
CCACCCGTGC CATTTATTGG TAAAGGGACG TCTGTTACGG CAACACAACC TCCACAGAAA
AAACGTGGCA GGAAATCATT AAAAGAAGTG GCAGATGACC CGGACCTGAT GAGAGCATTA
GATGCAATCC CCCTGGATAA GCAATATTAC TCAATCAGTG AAGTGGCCAC GATGTTTCGC
GTAAATACCT CATTGATCCG CTACTGGGAG AATGAGTTTG ATATATTACA GCCTAAAAAG
AACCGAAAAG GCGACCGTTT ATTCCGCCAG GAAGACATTC AGCACCTGAA ACTTATCTAT
CATTTACTAA GAGAACGGAA ATATACTATC GAAGGTGCTA AACAAAAATT GAAAGAAGAC
CGTAAACTGG CAGCCCGCAG TTTCGAAATG GTACAAGCTT TGCTAAAGGT AAGAGGTTTT
CTGACCGAAC TGAAGGAACA ATTATAA
 
Protein sequence
MQQLDLFSSP DPKPQVQVPE QVQEPVVVIK PAPAPPPPPR PQPEVEIPVK IQVQMPSDNL 
PPVPFIGKGT SVTATQPPQK KRGRKSLKEV ADDPDLMRAL DAIPLDKQYY SISEVATMFR
VNTSLIRYWE NEFDILQPKK NRKGDRLFRQ EDIQHLKLIY HLLRERKYTI EGAKQKLKED
RKLAARSFEM VQALLKVRGF LTELKEQL