| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0441 |
|---|
| Symbol | |
|---|
| ID | 8356547 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 524381 |
|---|
| End bp | 525535 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644962587 |
|---|
| Product | amidohydrolase |
|---|
| Protein accession | YP_003120140 |
|---|
| Protein GI | 256419487 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAAC AGCTGAAATT TAAGGGAACG GCATTATTTA ACGGGCGGCA GTTATTGCCC
GGGAGTATGG TACTGGTATT GACAGACGGT GGAATCGTGC AAGACATCGT ACACGAGAGC
GAAGCAGGGG AGGGTGTCAG GGAACTCAAC GGCATCCTGA GCCCGGGTTT TGTGAATACG
CACTGTCACC TGGAATTGTC CCATATGGGG GGAATCATCC CGGAAGGAAC CGGTTTACCC
GCCTTTCTGA CCAGTGTAAT GGAGAAAAGA GGGCAGCAGG ATACCTCCGC CCAGGTATTG
GCCATGGAAA AGGCAGCCAC CGCCATGTGG AAAAGTGGCG TCTCTGCCGT AGGCGATATC
TGTAATAGTA CCGCCTCCCT GGCACTGAAG AAAGACAGCC CTGTATATTA TCACTCCTTT
GTAGAAAGTA TGGGTTTTGT ACCCGGTTTT GCCCAACAAC GCTATGACTA CAGCCTGGGC
ATACTGGAGC AGTTTAAGGA GATCAATGGC CCGGGGCATT CTTCTTCCAT CGTTCCACAC
GCACCTTATT CGGTGAGCGA GGCCTTGTTT TCTTTGCTTT CGGCTACGCC GGATAATACC
CCTGTCAGCA TTCATAACCA GGAATGTGAG GCCGAAAACA CCCTTTACCA GGATAAGTCG
GGCGCTTTCC TCGACTTCTA CCAGCACTTT AATATGGATG CTTCCGCATT CAGAGCCAGT
GGCACGAATA GTTTACCGGC ATGGCTCCCC TGGTTTAAAC ACCTGCCGGT CATCCTGGTA
CATAATACAT ATACCACCGA AAAAGATATC GCCTTTACCA GGGAACAGGC GCCGAATGCA
TACTGGTGTC TCTGTCCGCA GGCCAATCTG TATATTGAAA AACGGATGCC CGATGTCCCC
CTCCTGCGTA GTCAGGGTTG TACGATCACC CTTGGTACAG ATAGTCTGGC GTCCAATCAT
GAGCTATCCA TCTGGCAGGA AATCCAGACC ATCCGTAAGT ATTACTCAAA TATTGCACTG
GAGGAAATAT TGCAATGGGC AACCCTGAAC GGAGCAATGG CACTGGGGAT TGACGGGAAA
TATGGCAGCT TTGAGAAAGG CCGGCAGCCG GGCGTAATAC TAATAGATGA ACAGGAAAGC
CGCAGGATTC TATAA
|
|---|
| Protein sequence | MSEQLKFKGT ALFNGRQLLP GSMVLVLTDG GIVQDIVHES EAGEGVRELN GILSPGFVNT
HCHLELSHMG GIIPEGTGLP AFLTSVMEKR GQQDTSAQVL AMEKAATAMW KSGVSAVGDI
CNSTASLALK KDSPVYYHSF VESMGFVPGF AQQRYDYSLG ILEQFKEING PGHSSSIVPH
APYSVSEALF SLLSATPDNT PVSIHNQECE AENTLYQDKS GAFLDFYQHF NMDASAFRAS
GTNSLPAWLP WFKHLPVILV HNTYTTEKDI AFTREQAPNA YWCLCPQANL YIEKRMPDVP
LLRSQGCTIT LGTDSLASNH ELSIWQEIQT IRKYYSNIAL EEILQWATLN GAMALGIDGK
YGSFEKGRQP GVILIDEQES RRIL
|
|---|
| |